Results 71 to 80 of about 5,063 (236)

The search for Schizosaccharomyces fission yeasts in environmental metatranscriptomes

open access: yesYeast, 2021
Fission yeast is an important model organism in evolutionary genetics and cell biology research. Nevertheless, most research is limited to a single laboratory strain and knowledge of its natural occurrence is limited, which reduces our understanding of ...
R. Shraim, B. Nieuwenhuis
semanticscholar   +1 more source

Viral contigs from surface seawater cellular metatranscriptomes

open access: yes, 2018
Partial viral genomes assembled from cellular metatranscriptomes of cells 0.2-1u from surface seawater in the San Pedro Channel, CA ...
Ella Sieradzki (5216747)
core   +1 more source

Understanding human health through metatranscriptomics

open access: yesTrends in Molecular Medicine, 2023
Metatranscriptomics has revolutionized our ability to explore and understand transcriptional programs in microbial communities. Moreover, it has enabled us to gain deeper and more specific insight into the microbial activities in human gut, respiratory, oral, and vaginal communities. Perhaps the most important contribution of metatranscriptomics arises,
Teija Ojala   +2 more
openaire   +2 more sources

Metatranscriptome and metagenome reads recruited to the glcD gene of Acidovorax JMULE5, Deinococcus JMULE3, and Paenibacillus JMULE4.

open access: yes, 2021
Libraries from Lake Erie metatranscriptomes (Steffen et al., 2017; Stough et al., 2019), Taihu metatranscriptomes (Stough et al., 2019), and Greenfield metagenomes were recruited to each glcD gene.
Morgan M. Steffen (6629246)   +16 more
core   +1 more source

Metatranscriptomic exploration of microbial functioning in clouds [PDF]

open access: yesScientific Reports, 2019
Abstract Clouds constitute the uppermost layer of the biosphere. They host diverse communities whose functioning remains obscure, although biological activity potentially participates to atmospheric chemical and physical processes.
Amato, Pierre   +5 more
openaire   +3 more sources

Osmotolerance is a driver of microbial carbon processes in the Elbe estuary

open access: yesmSystems
Estuaries are blue carbon loci, storing and exchanging carbon between aquatic, atmospheric, and terrestrial environments. Estuarine particles facilitate the transformation and transport of organic matter.
Sven P. Tobias-Hünefeldt   +6 more
doaj   +1 more source

Metatranscriptomic scripts and Data

open access: yes, 2022
Scripts and some intermediate data used in processing metatranscriptomes in the paper.
Alex Crits-christoph (816377)
core   +1 more source

Relating the metatranscriptome and metagenome of the human gut [PDF]

open access: yesProceedings of the National Academy of Sciences, 2014
Significance Recent years have seen incredible growth in both the scale and specificity of projects analyzing the microbial organisms living in and on the human body (the human microbiome). Such studies typically require subjects to report to clinics for sample collection, a complicated practice that is impractical for large studies ...
E. A. Franzosa   +13 more
openaire   +3 more sources

Salinity-driven niche partitioning of aquatic viruses in one of Europe’s largest estuaries

open access: yesApplied and Environmental Microbiology
Viruses are a vital part of the aquatic food web and hold a profound role in carbon and energy cycling at different trophic levels. Despite the rising interest in aquatic viruses, very few studies were conducted in estuaries, where freshwater and marine ...
Julia Gołębiowska   +3 more
doaj   +1 more source

Additional file 4 of Seasonal patterns in microbial carbon and iron transporter expression in the Southern Ocean

open access: yes, 2023
Additional file 4: Supplementary Figure 4. Compound-specific transporter transcripts. ES: Early spring; LS: Late summer. Relative proportion of compound-specific transporter transcripts of tranporters present in metatranscriptomes (see Methods section ...
Ying Sun (16853148)   +4 more
core   +1 more source

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