Results 111 to 120 of about 9,285 (257)

Plant and soil biodiversity reveals past and potential future states of naturally regenerating and planted native forests

open access: yesRestoration Ecology, EarlyView.
Abstract Introduction Forest restoration can be achieved by promoting natural regeneration or planting tree seedlings, but the relative benefits of these widely used approaches are questioned. Soil communities may influence restoration outcomes but are usually ignored by monitoring schemes.
Andrew Dopheide   +10 more
wiley   +1 more source

Training Data for "Metatranscriptomics analysis using microbiome RNASeq data"

open access: yes, 2019
<p>Microbiomes play a critical role in host health, disease, and the environment.. Functional microbiome analysis which estimates the functional groups expressed by microbial community enables researchers to look beyond taxonomic composition and ...
Subina Mehta (5721521)   +7 more
core   +1 more source

Deep Understanding of Vaginal Microbiota in HPV‐Related Diseases From a Multi‐Omics Perspective

open access: yesVIEW Medicine, Volume 1, Issue 1, August 2026.
Current understanding of the vaginal microbiota and roles of critical vaginal bacteria, including Lactobacillus and anaerobic pathogens, in human papillomavirus (HPV) infection and HPV‐related diseases from a multi‐omics perspective. ABSTRACT There is a large number of microorganisms in the human body, which are inseparable from human health.
Jianxujie Zheng   +3 more
wiley   +1 more source

Metaproteomics Powered By Metatranscriptomics: Towards a Multi-omic Functional Microbiome Analysis Within Galaxy

open access: yes, 2019
International audienceMicrobiomes play a critical role in health and disease in human hosts and in environmentalecosystems. Characterizing their microbial composition and functional role requires analysis of multi-omics data such as metagenomics ...
Kumar, Praveen   +14 more
core   +1 more source

Forest floor community metatranscriptomes identify fungal and bacterial responses to N deposition in two maple forests

open access: yesFrontiers in Microbiology, 2015
Anthropogenic N deposition alters patterns of C and N cycling in temperate forests, where forest floor litter decomposition is a key process mediated by a diverse community of bacteria and fungi.
Cedar N Hesse   +6 more
doaj   +1 more source

Strain‐Specific Biotransformation of Grape Marc by Lactic Acid Bacteria: Genomic Validation and Gut Microbiota Modulation

open access: yesFood Frontiers, Volume 7, Issue 4, July 2026.
ABSTRACT Grape marc (GM) is a polyphenol‐rich winery byproduct that remains underutilized due to its complex fiber matrix, which limits the bioaccessibility of bound phenolics. While lactic acid fermentation (LAF) can enhance the release of these compounds, the strain‐specific metabolic fate of GM phenolics during digestion and colonic fermentation ...
Ziyao Liu   +4 more
wiley   +1 more source

Intratumoral Microbiota in Tumor: Current Understandings and Future Perspectives

open access: yesMedComm, Volume 7, Issue 7, July 2026.
Intratumoral bacteria are emerging as active regulators of cancer evolution rather than bystanders. This review outlines how tumor‐resident microbes drive tumor initiation and growth by inducing genomic instability, epigenetic reprogramming, oncogenic signaling, and chronic inflammation, while promoting metastatic spread via invasion, angiogenesis ...
Jiawei Chen   +6 more
wiley   +1 more source

Metatranscriptomics reveals shift in microbial community composition and function (Supporting Information)

open access: yes, 2022
Supporting data for the analysis "Metatranscriptomics reveals a shift in microbial community composition and function during summer months in a coastal marine environment", a manuscript prepared by Sutherland, Finke, et al. (2022).
Ben Sutherland (816362)   +8 more
core   +1 more source

The grapevine microbiota: A review on the possible impacts of plant protection programs on phyllosphere microorganisms

open access: yesAnnals of Applied Biology, Volume 189, Issue 1, July 2026.
This review highlights recent advances in understanding how plant protection programs and alternative fungicides affect the taxonomic composition of the grapevine phyllosphere microbiota. Bacterial and fungal communities are primarily shaped by the plant compartment, vineyard location, and sampling time. Plant protection programs generally have a minor
Sofia Montanari   +6 more
wiley   +1 more source

Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities

open access: yesFrontiers in Microbiology, 2014
One of the major environmental concerns of the Deepwater Horizon oil spill in the Gulf of Mexico was the ecological impact of the oil that reached shorelines of the Gulf Coast.
Regina eLamendella   +9 more
doaj   +1 more source

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