Evaluating the Nuclear Reaction Optimization (NRO) Algorithm for Gene Selection in Cancer Classification. [PDF]
Alkamli S, Alshamlan H.
europepmc +1 more source
How far are we from the era of big data in transcriptomics? Lessons from the bacterial data in GEO. [PDF]
Escobedo-Muñoz AS +3 more
europepmc +1 more source
Integrated Single-Cell Analysis Reveals the Heterogeneity of Tumor-Associated Macrophages and Their Implications for Immunotherapy in Colorectal Cancer. [PDF]
Xu G, Fang B, Tang X, Wei Q, Li J.
europepmc +1 more source
ACG-SFE: Adaptive cluster-guided simple, fast, and efficient feature selection for high-dimensional microarray data in binary classification. [PDF]
Tye YW, Chew X, Yusof UK, Tulpar S.
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Fuzzy set-based microarray data analysis techniques for interesting block identification
Microarrays are one of biotechnology products which enable to measure the expression level of thousands of genes simultaneously. It is sometimes crucial to identify some interesting blocks from microarray data for further investigation. Due to the massive volume of data, it is desirable to get assistance of software tools to handle this task.
Keon Myung Lee +2 more
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Analysis techniques for microarray time-series data
Proceedings of the fifth annual international conference on Computational biology, 2001We address possible limitations of publicly available data sets of yeast gene expression. We study the predictability of known regulators via time-series analysis, and show that less than 20% of known regulatory pairs exhibit strong correlations in the Cho/Spellman data sets.
Vladimir, Filkov +2 more
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A Survey on Filter Techniques for Feature Selection in Gene Expression Microarray Analysis
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2012A plenitude of feature selection (FS) methods is available in the literature, most of them rising as a need to analyze data of very high dimension, usually hundreds or thousands of variables. Such data sets are now available in various application areas like combinatorial chemistry, text mining, multivariate imaging, or bioinformatics.
Lazar, Cosmin +9 more
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Pattern Recognition Techniques in Microarray Data Analysis
Annals of the New York Academy of Sciences, 2002Abstract:Recent development of technologies (e.g., microarray technology) that are capable of producing massive amounts of genetic data has highlighted the need for new pattern recognition techniques that can mine and discoverbiologically meaningfulknowledge in large data sets.
F. Valafar
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