Results 81 to 90 of about 185,542 (303)

Multi-membership gene regulation in pathway based microarray analysis [PDF]

, 2011
This article is available through the Brunel Open Access Publishing Fund. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use,
A Goesmann, AB Khodursky, Annette M Payne, AP Gasch, D Cavalieri, D Greenbaum, E Panteris, FA Kolpakov, FR Blattner, G Russo, I Rojas, JH Holland, JL DeRisi, KD Dahlquist, L Stryer, M Kanehisa, M Quadroni, M Schena, P Grosu, P Shannon, PC Champe, PD Karp, R Hamming, RK Brouwer, S Kirkpatrick, S Pavlidis, S Swift, SJ Russell, Stelios P Pavlidis, Stephen M Swift, T Toyoda, Z Michalewicz   +31 more
core   +3 more sources

Exploring the role of cyclin D1 in the pathogenesis of multiple myeloma beyond cell cycle regulation

Molecular Oncology, EarlyView.
Cyclin D1 overexpression altered the cell adhesion pathway, while cyclin D2 upregulation had less impact on pathway enrichment analysis. Multiple myeloma (MM) patients with cyclin D1 overexpression showed reduced CD56 expression and increased circulating tumor cells (CTC) levels, suggesting that cyclin D1 may contribute to MM cell dissemination ...
Ignacio J. Cardona‐Benavides, Sara Cristobal‐Vargas, Cristina De Ramón, Elizabeta A. Rojas, Irena Misiewicz‐Krzeminska, Isabel Isidro, José Juan Pérez, Bruno Paiva, Noemi Puig, Miguel Alcoceba, María‐Victoria Mateos, Luis A. Corchete, Myriam Cuadrado, Norma C. Gutiérrez   +13 more
wiley   +1 more source

RNA sequencing and microarray analysis are helpful techniques to detect obesity-related lncRNAs. LncRNA can alter cholesterol metabolism and can be a target for gene therapy [PDF]

, 2021
Moataz Dowaidar
  +5 more sources

A comparison on effects of normalisations in the detection of differentially expressed genes

BMC Bioinformatics, 2009
Background Various normalisation techniques have been developed in the context of microarray analysis to try to correct expression measurements for experimental bias and random fluctuations.
Risso Davide, Massa Maria Sofia, Chiogna Monica, Romualdi Chiara   +3 more
doaj   +1 more source

Imputation of truncated p-values for meta-analysis methods and its genomic application

, 2014
Microarray analysis to monitor expression activities in thousands of genes simultaneously has become routine in biomedical research during the past decade.
Ding, Ying, Lariviere, William R., Mogil, Jeffrey S., Sibille, Etienne, Tang, Shaowu, Tseng, George C.   +5 more
core   +1 more source

Modeling and Estimation for Real-Time Microarrays [PDF]

, 2008
Microarrays are used for collecting information about a large number of different genomic particles simultaneously. Conventional fluorescent-based microarrays acquire data after the hybridization phase.
Hassibi, Arjang, Hassibi, Babak, Vikalo, Haris   +2 more
core   +2 more sources

PARP inhibitors elicit distinct transcriptional programs in homologous recombination competent castration‐resistant prostate cancer

Molecular Oncology, EarlyView.
PARP inhibitors are used to treat a small subset of prostate cancer patients. These studies reveal that PARP1 activity and expression are different between European American and African American prostate cancer tissue samples. Additionally, different PARP inhibitors cause unique and overlapping transcriptional changes, notably, p53 pathway upregulation.
Moriah L. Cunningham, Jasibel Vasquez‐Gonzalez, Samantha M. Barnada, Salome Tchotorlishvili, Latese Jones, Ryan Maguire, Genevieve Lewis, Kinza Rizwan, Jenny Deng, Salma Koachar, Drithi Patel, Hailey Shankle, Tessa Mulders, Namra Ajmal, Charalambos Solomides, Emad S. Alnemri, Teresa F. Alnemri, Ayesha A. Shafi, Leonard G. Gomella, Wm Kevin Kelly, Steven B. McMahon, Matthew J. Schiewer   +21 more
wiley   +1 more source

The OncoFinder algorithm for minimizing the errors introduced by the high-throughput methods of transcriptome analysis

Frontiers in Molecular Biosciences, 2014
The diversity of the installed sequencing and microarray equipment make it increasingly difficult to compare and analyze the gene expression datasets obtained using the different methods.
Anton A. Buzdin, Anton A. Buzdin, Anton A. Buzdin, Alex eZhavoronkov, Alex eZhavoronkov, Alex eZhavoronkov, Mikhail eKorzinkin, Mikhail eKorzinkin, Sergey A Roumiantsev, Alexander M Aliper, Alexander M Aliper, Alexander M Aliper, Larisa S. Venkova, Larisa S. Venkova, Philip eSmirnov, Philip eSmirnov, Nicolay M Borisov, Nicolay M Borisov   +17 more
doaj   +1 more source

Regulation of neutrophil senescence by microRNAs [PDF]

, 2011
Neutrophils are rapidly recruited to sites of tissue injury or infection, where they protect against invading pathogens. Neutrophil functions are limited by a process of neutrophil senescence, which renders the cells unable to respond to chemoattractants,
A Bonauer, A Lee, AD Kennedy, AS Cowburn, AW Ford-Hutchinson, C Haslett, C Martin, CH Wang, CL Andersen, DP Bartel, E Berezikov, E Tsitsiou, EP Cronkite, F Bazzoni, F Colotta, F Fazi, Frank R. DeLeo, GM Bokoch, H Su, H Xia, I Sabroe, I Sabroe, J Davidson-Moncada, J Savill, J Yu, James W. Catto, JB Johnnidis, JJ Lum, JL Mott, Jon R. Ward, JR Ward, LR Prince, M Merkerova, M Scherr, Marta Milo, MK Whyte, MK Whyte, Moira K. B. Whyte, OD Weiner, P Scapini, PA Davoren, Paul R. Heath, PT Nelson, R Chhabra, R Yi, RE Stringer, RW Watson, S Huang, S Radom-Aizik, S Slezak, SA Renshaw, SD Kobayashi, SD Kobayashi, Stephen A. Renshaw, W Filipowicz, W Huang da, WC Liles, WP Tsang, Y Lee, Y Wang, YZ Pan   +60 more
core   +4 more sources

Bridging the gap: Multi‐stakeholder perspectives of molecular diagnostics in oncology

Molecular Oncology, EarlyView.
Although molecular diagnostics is transforming cancer care, implementing novel technologies remains challenging. This study identifies unmet needs and technology requirements through a two‐step stakeholder involvement. Liquid biopsies for monitoring applications and predictive biomarker testing emerge as key unmet needs. Technology requirements vary by
Jorine Arnouts, Senada Koljenović, Elise Daems, Karolien De Wael, Marc Peeters, Léon C. van Kempen, Greetje Vanhoutte, Karen Zwaenepoel, Timon Vandamme   +8 more
wiley   +1 more source