IEEE Access, 2020 Prostate Cancer is a cancer that occurs in the prostate- a small walnut shaped gland in men. This gland helps in the production of seminal fluid which is used to nourish and transport the sperm.
Sunil Kumar Prabhakar, Seong-Whan Lee
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Application of COMPOCHIP Microarray to Investigate the Bacterial Communities of Different Composts [PDF]
, 2009 A microarray spotted with 369 different 16S rRNA gene probes specific to microorganisms involved in the degradation process of organic waste during composting was developed. The microarray was tested with pure cultures, and of the 30,258 individual probe-
A Alfreider +54 more
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RNA sequencing and microarray analysis are helpful techniques to detect obesity-related lncRNAs. LncRNA can alter cholesterol metabolism and can be a target for gene therapy [PDF]
, 2021 Moataz Dowaidar
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A comparison on effects of normalisations in the detection of differentially expressed genes
BMC Bioinformatics, 2009 Background Various normalisation techniques have been developed in the context of microarray analysis to try to correct expression measurements for experimental bias and random fluctuations.
Risso Davide +3 more
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Frontiers in Molecular Biosciences, 2014 The diversity of the installed sequencing and microarray equipment make it increasingly difficult to compare and analyze the gene expression datasets obtained using the different methods.
Anton A. Buzdin +17 more
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Inferring causal relations from multivariate time series : a fast method for large-scale gene expression data [PDF]
, 2009 Various multivariate time series analysis techniques have been developed with the aim of inferring causal relations between time series. Previously, these techniques have proved their effectiveness on economic and neurophysiological data, which normally ...
Li, Chang-Tsun, Yuan, Yinyin
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Stability of Ranked Gene Lists in Large Microarray Analysis Studies
Journal of Biomedicine and Biotechnology, 2010 This paper presents an empirical study that aims to explain the relationship between the number of samples and stability of different gene selection techniques for microarray datasets.
G. Štiglic, P. Kokol
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Stable Feature Selection for Biomarker Discovery [PDF]
, 2010 Feature selection techniques have been used as the workhorse in biomarker discovery applications for a long time. Surprisingly, the stability of feature selection with respect to sampling variations has long been under-considered.
He, Zengyou, Yu, Weichuan
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A Comparative Study of Techniques for Differential Expression Analysis on RNA-Seq Data
bioRxiv, 2014 Recent advances in next-generation sequencing technology allow high-throughput cDNA sequencing (RNA-Seq) to be widely applied in transcriptomic studies, in particular for detecting differentially expressed genes between groups.
Zong-Hong Zhang +10 more
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Profound effect of profiling platform and normalization strategy on detection of differentially expressed microRNAs [PDF]
, 2012 Adequate normalization minimizes the effects of systematic technical variations and is a prerequisite for getting meaningful biological changes. However, there is inconsistency about miRNA normalization performances and recommendations.
Kaiser, Sebastian +4 more
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