Metatranscriptomes from diverse microbial communities: assessment of data reduction techniques for rigorous annotation [PDF]
, 2014 Background Metatranscriptome sequence data can contain highly redundant sequences from diverse populations of microbes and so data reduction techniques are often applied before taxonomic and functional annotation.
Mock, Thomas +3 more
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Draft genome sequence of Massilia sp. KIM isolated from South African grassland biome soils
Genomics Data, 2017 Massilia sp. are aerobic, Gram-negative, rod-shaped bacteria that are found in air, water, and soils. Here we describe the draft genome sequence of Massilia sp. KIM, isolated from the South African grassland soils.
Surendra Vikram +4 more
doaj +1 more source
RegPrecise web services interface: programmatic access to the transcriptional regulatory interactions in bacteria reconstructed by comparative genomics. [PDF]
, 2012 Web services application programming interface (API) was developed to provide a programmatic access to the regulatory interactions accumulated in the RegPrecise database (http://regprecise.lbl.gov), a core resource on transcriptional regulation for the ...
Arkin, Adam P +6 more
core +2 more sources
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mBio, 2016 Anthrax is a zoonotic disease that occurs naturally in wild and domestic animals but has been used by both state-sponsored programs and terrorists as a biological weapon.
Jason W. Sahl +13 more
doaj +1 more source
Genomic data resource of type strains of genus Pseudoxanthomonas
Data in Brief, 2022 Genus Pseudoxanthomonas represents a relatively newly characterized group of gamma-proteobacterium of environmental origin. Species of the genus have very similar morphology to strains belonging to Xanthomonas, Xylella and Stenotrophomonas.
Kanika Bansal +4 more
doaj +1 more source
Alkane hydroxylase genes in psychrophile genomes and the potential for cold active catalysis. [PDF]
, 2014 BackgroundPsychrophiles are presumed to play a large role in the catabolism of alkanes and other components of crude oil in natural low temperature environments.
Bowman, Jeff S, Deming, Jody W
core +2 more sources
Microbial genomics and infectious diseases. [PDF]
N Engl J Med, 2011 Relman DA.
europepmc +2 more sources
Comparative genomic analysis of Geobacter sulfurreducens KN400, a strain with enhanced capacity for extracellular electron transfer and electricity production [PDF]
, 2012 Peer ...
Aklujkar, Muktak +3 more
core +4 more sources
Frontiers in Microbiology, 2019 The alarmone species ppGpp and pppGpp are elementary components of bacterial physiology as they both coordinate the bacterial stress response and serve as fine-tuners of general metabolism during conditions of balanced growth.
Matthias Ruwe +4 more
doaj +1 more source
mSphere, 2020 Xanthomonas species are primarily known as a group of phytopathogens infecting diverse plants. Recent molecular studies reveal the existence of potential novel species and strains of Xanthomonas following a nonpathogenic lifestyle.
Kanika Bansal +2 more
doaj +1 more source