Results 1 to 10 of about 19,589 (226)

Simultaneous amplicon analysis of multiple soil samples using MinION sequencing

open access: yesMethodsX, 2021
The diversity and composition of soil microorganisms needs to be understood as they influence ecosystem processes. MinION is a relatively recent next-generation sequencer, which provides the advantage of sequencing long reads. In this study, two types of
Shuichi Asakawa   +2 more
exaly   +3 more sources

Rapid and Routine Molecular Typing Using Multiplex Polymerase Chain Reaction and MinION Sequencer

open access: yesFrontiers in Microbiology, 2022
Molecular typing is an essential tool that has been extensively applied in laboratories as well as in clinical settings. Next-generation sequencing technologies promise high-throughput and cost-effective molecular applications; however, the accessibility
Ci-Hong Liou   +2 more
exaly   +3 more sources

Whole Genome Sequencing of Influenza A and B Viruses With the MinION Sequencer in the Clinical Setting: A Pilot Study

open access: yesFrontiers in Microbiology, 2018
Introduction: Whole genome sequencing (WGS) of influenza viruses is important for preparing vaccines and coping with newly emerging viruses. However, WGS is difficult to perform using conventional next-generation sequencers in developing countries, where
Takuya Maeda   +2 more
exaly   +3 more sources

Draft Genome of the Insect-Parasitic Nematode Bradynema listronoti

open access: yesJournal of Nematology, 2022
Bradynema listronoti is an insect-parasitic nematode known to infect the carrot weevil, Listronotus oregonensis. We present the first sequence for this species and for any Allantonematidae, produced with a combination of short and long reads.
Ste-Croix Dave T.   +2 more
doaj   +1 more source

The complete mitochondrial genome of Mystus gulio Hamilton (Siluriformes: Bagridae) and its phylogenetic implication

open access: yesMitochondrial DNA. Part B. Resources, 2023
Mystus gulio Hamilton, also called long whiskers catfish, is an endemic fish and a common food in some Asian countries. In this study, the complete mitochondrial genome of M. gulio was sequenced using the MinION system (Oxford Nanopore Technologies). The
Hoang Danh Nguyen   +2 more
doaj   +1 more source

Novel HPAIV H5N8 Reassortant (Clade 2.3.4.4b) Detected in Germany

open access: yesViruses, 2020
A novel H5N8 highly pathogenic avian influenza virus (HPAIV) was detected in a greater white-fronted goose in January 2020 in Brandenburg, Germany, and, in February 2020, in domestic chickens belonging to a smallholding in Baden-Wuerttemberg, Germany ...
Jacqueline King   +11 more
doaj   +1 more source

Discovery of Avian Paramyxoviruses APMV-1 and APMV-6 in Shorebirds and Waterfowl in Southern Ukraine

open access: yesViruses, 2023
Emerging RNA virus infections are a growing concern among domestic poultry industries due to the severe impact they can have on flock health and economic livelihoods.
Amy C. Klink   +23 more
doaj   +1 more source

Mitochondrial genome of the Silvertip shark, Carcharhinus albimarginatus, from the British Indian Ocean Territory

open access: yesMitochondrial DNA. Part B. Resources, 2020
The Chagos archipelago in the British Indian Ocean Territory (BIOT) has been lacking in detailed genetic studies of its chondrichthyan populations. Chondrichthyes in Chagos continue to be endangered through illegal fishing operations, necessitating ...
Shaili Johri   +6 more
doaj   +1 more source

Genome Improvement and Genetic Map Construction for Aethionema arabicum, the First Divergent Branch in the Brassicaceae Family

open access: yesG3: Genes, Genomes, Genetics, 2019
The genus Aethionema is a sister-group to the core-group of the Brassicaceae family that includes Arabidopsis thaliana and the Brassica crops. Thus, Aethionema is phylogenetically well-placed for the investigation and understanding of genome and trait ...
Thu-Phuong Nguyen   +7 more
doaj   +1 more source

Whole human genome 5’-mC methylation analysis using long read nanopore sequencing

open access: yesEpigenetics, 2022
Methylation microarray and bisulphite sequencing are often used to study 5’-methylcytosine (5’-mC) modification of CpG dinucleotides in the human genome.
Catarina Silva   +4 more
doaj   +1 more source

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