Results 11 to 20 of about 19,493 (242)

MinION nanopore sequencing of an influenza genome [PDF]

open access: yesFrontiers in Microbiology, 2015
Influenza epidemics and pandemics have significant impacts on economies, morbidity and mortality worldwide. The ability to rapidly and accurately sequence influenza viruses is instrumental in the prevention and mitigation of influenza. All eight influenza genes from an influenza A virus were amplified by PCR simultaneously and then subjected to ...
Nicole E Moore   +2 more
exaly   +5 more sources

Resolving plasmid structures in Enterobacteriaceae using the MinION nanopore sequencer: assessment of MinION and MinION/Illumina hybrid data assembly approaches

open access: yesMicrobial Genomics, 2017
This study aimed to assess the feasibility of using the Oxford Nanopore Technologies (ONT) MinION long-read sequencer in reconstructing fully closed plasmid sequences from eight Enterobacteriaceae isolates of six different species with plasmid populations of varying complexity.
George, S   +12 more
openaire   +5 more sources

Rapid and Routine Molecular Typing Using Multiplex Polymerase Chain Reaction and MinION Sequencer

open access: yesFrontiers in Microbiology, 2022
Molecular typing is an essential tool that has been extensively applied in laboratories as well as in clinical settings. Next-generation sequencing technologies promise high-throughput and cost-effective molecular applications; however, the accessibility
Yu-Chieh Liao   +2 more
exaly   +3 more sources

Whole Genome Sequencing of Influenza A and B Viruses With the MinION Sequencer in the Clinical Setting: A Pilot Study

open access: yesFrontiers in Microbiology, 2018
Introduction: Whole genome sequencing (WGS) of influenza viruses is important for preparing vaccines and coping with newly emerging viruses. However, WGS is difficult to perform using conventional next-generation sequencers in developing countries, where
Kazuo Imai   +2 more
exaly   +3 more sources

MinION Sequencing of colorectal cancer tumour microbiomes-A comparison with amplicon-based and RNA-Sequencing.

open access: yesPLoS ONE, 2020
BACKGROUND:Recent evidence suggests a role for the gut microbiome in the development and progression of many diseases and many studies have been carried out to analyse the microbiome using a variety of methods. In this study, we compare MinION sequencing
William S Taylor   +5 more
doaj   +2 more sources

Understanding and evaluating the MinION

open access: yes
Honeybees are an important pollinator around the world and is used in agriculture, the bees also make products like honey, royal jelly and wax these products make up a market worth 15 billion dollars in the US. Honeybees are on the decline and a problem might be damage to the microbiota in the gut.
Kull Johansson, Filip
core   +3 more sources

Draft Genome of the Insect-Parasitic Nematode Bradynema listronoti

open access: yesJournal of Nematology, 2022
Bradynema listronoti is an insect-parasitic nematode known to infect the carrot weevil, Listronotus oregonensis. We present the first sequence for this species and for any Allantonematidae, produced with a combination of short and long reads.
Ste-Croix Dave T.   +2 more
doaj   +1 more source

The complete mitochondrial genome of Mystus gulio Hamilton (Siluriformes: Bagridae) and its phylogenetic implication

open access: yesMitochondrial DNA. Part B. Resources, 2023
Mystus gulio Hamilton, also called long whiskers catfish, is an endemic fish and a common food in some Asian countries. In this study, the complete mitochondrial genome of M. gulio was sequenced using the MinION system (Oxford Nanopore Technologies). The
Hoang Danh Nguyen   +2 more
doaj   +1 more source

Novel HPAIV H5N8 Reassortant (Clade 2.3.4.4b) Detected in Germany

open access: yesViruses, 2020
A novel H5N8 highly pathogenic avian influenza virus (HPAIV) was detected in a greater white-fronted goose in January 2020 in Brandenburg, Germany, and, in February 2020, in domestic chickens belonging to a smallholding in Baden-Wuerttemberg, Germany ...
Jacqueline King   +11 more
doaj   +1 more source

Discovery of Avian Paramyxoviruses APMV-1 and APMV-6 in Shorebirds and Waterfowl in Southern Ukraine

open access: yesViruses, 2023
Emerging RNA virus infections are a growing concern among domestic poultry industries due to the severe impact they can have on flock health and economic livelihoods.
Amy C. Klink   +23 more
doaj   +1 more source

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