Results 141 to 150 of about 120,736 (335)

GenomeTrakr WGS Protocol Collection and Workflow for MiSeq v1

open access: yes, 2022
Here we have created a collection of all the protocols used for WGS using the MiSeq, in order, from sample extraction to NCBI submission. This collection has three sections: Section 1: WGS Wet lab workflow for Illumina MiSeq Section 2: Dry lab workflow for sequence QC and NCBI submission - Direct Submission Section 3: Dry lab workflow for sequence ...
openaire   +1 more source

Impact of a Glyphosate-Tolerant Soybean Line on the Rhizobacteria, Revealed by Illumina MiSeq

open access: yesJournal of Microbiology and Biotechnology, 2017
The global commercial cultivation of transgenic crops, including glyphosate-tolerant soybean, has increased widely in recent decades with potential impact on the environment. The bulk of previous studies showed different results on the effects of the release of transgenic plants on the soil microbial community, especially rhizosphere bacteria.
Gui-Hua, Lu   +10 more
openaire   +2 more sources

Microbial keystone taxa and metabolic signatures in centenarians regulate intestinal homeostasis during aging

open access: yesiMeta, EarlyView.
Clostridium scindens and its metabolite indole‐3‐acetic acid (IAA) are identified as a keystone taxon and metabolic signature in centenarians. Clostridium scindens enhances microbial network stability and produces IAA via its own amidase (AMIE) and aldehyde dehydrogenase (ALDH), thus promoting intestinal homeostasis by activating the aryl hydrocarbon ...
Wei‐Chuan Lin   +13 more
wiley   +1 more source

Viral genome sequencing of P10 with RDV and P10 without RDV viruses by MiSeq.

open access: yes, 2023
Viral genome sequencing of P10 with RDV and P10 without RDV viruses by MiSeq.
Shiho Torii (12770667)   +16 more
core   +1 more source

Beta‐Thalassemia in Spain: Results From the National Thalassemia Registry and Molecular Analysis of Patients With Transfusion‐Dependent Thalassemia

open access: yesJournal of Clinical Laboratory Analysis, EarlyView.
This nationwide registry‐based study describes the clinical and molecular characteristics of 78 patients with transfusion‐dependent beta‐thalassemia in Spain. Comprehensive genetic analysis revealed marked molecular heterogeneity, with 24 HBB mutations identified and a predominance of β0 genotypes, alongside generally effective transfusion and iron ...
Ana Villegas   +41 more
wiley   +1 more source

Novel rhesus macaque immunoglobulin germline genes identified by three sequencing approaches

open access: yesFrontiers in Immunology
IntroductionRhesus macaques have long been a focus of research for understanding immune responses to human pathogens due to their close phylogenetic relationship with humans.
Yicheng Guo   +8 more
doaj   +1 more source

De novo yeast genome assemblies from MinION, PacBio and MiSeq platforms

open access: yesScientific Reports, 2017
Long-read sequencing technologies such as Pacific Biosciences and Oxford Nanopore MinION are capable of producing long sequencing reads with average fragment lengths of over 10,000 base-pairs and maximum lengths reaching 100,000 base- pairs.
F. Giordano   +13 more
semanticscholar   +1 more source

Information concerning the samples multiplexed in the MiSeq run

open access: yes, 2015
This CSV file contains the sample names, the forward and reverse index names and the forward and reverse index sequences for each of the 190 samples multiplexed in the Illumina MiSeq ...
Maria Bernard (784328)   +17 more
core   +1 more source

16S Sequencing on Illumina MiSeq Platform v1

open access: yes
The 16S protocol detailed here is designed to amplify bacteria using V4-V5 hyper-variable regions of the 16S rRNA gene on the Illumina MiSeq DNA sequencer.
Angela Schmoldt, Melissa Schussman
openaire   +1 more source

Effect of ammonium concentration on methane oxidation and CO2 removal in an anaerobic biotrickling filter treating synthetic landfill gas and leachate

open access: yesJournal of Chemical Technology &Biotechnology, EarlyView.
Abstract BACKGROUND Landfill gas (LFG) and leachate are commonly treated separately through energy‐intensive processes. This study evaluated the integration of both streams in an anaerobic biotrickling filter (BTF) to achieve simultaneous methane (CH4) and carbon dioxide (CO2) removal coupled with ammonium (NH4+) transformation, and how the microbial ...
Cecilia Lizeth Alvarez‐Guzmán   +3 more
wiley   +1 more source

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