Results 71 to 80 of about 120,736 (335)

Insights into bacterioplankton community structure from Sundarbans mangrove ecoregion using Sanger and Illumina MiSeq sequencing approaches: A comparative analysis

Genomics Data, 2017
Next generation sequencing using platforms such as Illumina MiSeq provides a deeper insight into the structure and function of bacterioplankton communities in coastal ecosystems compared to traditional molecular techniques such as clone library approach ...
Anwesha Ghosh, Punyasloke Bhadury
doaj   +1 more source

Effects of wheat root exudates on bacterial communities in the rhizosphere of watermelon

Plant, Soil and Environment, 2021
In this study, we investigated the effects of wheat root exudates on soil bacterial communities in the watermelon rhizosphere using quantitative PCR and Illumina MiSeq sequencing.
Jibo Shi, Xiaoya Gong, Muhammad Khashi u Rahman, Qing Tian, Xingang Zhou, Fengzhi Wu   +5 more
doaj   +1 more source

Developmental validation of the ForenSeq® Kintelligence kit, MiSeq FGx® sequencing system and ForenSeq Universal Analysis Software.

Forensic Science International: Genetics
Forensic Investigative Genetic Genealogy, a recent sub discipline of forensic genomics, leverages the high throughput and sensitivity of detection of next generation sequencing and established genetic and genealogical approaches to support the ...
Joana Antunes, Paulina Walichiewicz, E. Forouzmand, Richelle Barta, Meghan Didier, Yonmee Han, Juan Carlos Pérez, June Snedecor, C. Zlatkov, Gothami Padmabandu, L. Devesse, Sarah M. Radecke, C. Holt, Swathi A. Kumar, Bruce Budowle, K. Stephens   +15 more
semanticscholar   +1 more source

MiSeq Barcodes

, 2015
Barcode/index file for MiSeq ...
Wood, Stephen A., McGuire, Krista L., Katherine L. Tully (2908361), Gilbert, Jack A., Jizhong Zhou (11753), Krista L. McGuire (384713), Tully, Katherine L., Bradford, Mark A., Stephen A. Wood (215371), Naeem, Shahid, Zhou, Jizhong, Jack A. Gilbert (53472), Cheryl A. Palm (217233), Shahid Naeem (116841), Mark A. Bradford (354912), Palm, Cheryl A.   +15 more
core   +1 more source

Comparative next-generation sequencing of adeno-associated virus inverted terminal repeats

BioTechniques, 2014
The inverted terminal repeats (ITRs) of adeno-associated virus (AAV) are notoriously difficult to sequence owing to their high GC-content (70%) and palindromic sequences that result in the formation of a very stable, 125 bp long, T-shaped hairpin ...
Karl Petri, Raffaele Fronza, Richard Gabriel, Christine Käppel, Ali Nowrouzi, R. Michael Linden, Els Henckaerts, Manfred Schmidt   +7 more
doaj   +1 more source

Comparative analysis of targeted next-generation sequencing for Plasmodium falciparum drug resistance markers

Scientific Reports, 2022
Well-defined molecular resistance markers are available for a range of antimalarial drugs, and molecular surveillance is increasingly important for monitoring antimalarial drug resistance.
Chanon Kunasol, Arjen M. Dondorp, Elizabeth M. Batty, Vorthunju Nakhonsri, Puritat Sinjanakhom, Nicholas P. J. Day, Mallika Imwong   +6 more
doaj   +1 more source

Nanopore duplex sequencing as an alternative to Illumina MiSeq sequencing for eDNA-based biomonitoring of coastal aquaculture impacts

Metabarcoding and Metagenomics
Oxford Nanopore Technologies has recently launched a duplex sequencing strategy and announced an improved error rate which is in a similar order of magnitude as Illumina sequencing.
T. Stoeck, S. Katzenmeier, H. Breiner, Verena Rubel   +3 more
semanticscholar   +1 more source

MiSeq data and sample guide

, 2018
16S amplicon MiSeq data used as input for mothurSample guide for MiSeq ...
Laura Williams (651107)
core   +1 more source

Next-generation sequencing-based multigene mutational screening for acute myeloid leukemia using MiSeq: applicability for diagnostics and disease monitoring

Haematologica, 2014
Routine molecular testing in acute myeloid leukemia involves screening several genes of therapeutic and prognostic significance for mutations. A comprehensive analysis using single-gene assays requires large amounts of DNA, is cumbersome and timely ...
Rajyalakshmi Luthra, Keyur P. Patel, Neelima G. Reddy, Varan Haghshenas, Mark J. Routbort, Michael A. Harmon, Bedia A. Barkoh, Rashmi Kanagal-Shamanna, Farhad Ravandi, Jorge E Cortes, Hagop M Kantarjian, L. Jeffrey Medeiros, Rajesh R. Singh   +12 more
doaj   +1 more source

Transmitting silks of maize have a complex and dynamic microbiome

Scientific Reports, 2021
In corn/maize, silks emerging from cobs capture pollen, and transmit resident sperm nuclei to eggs. There are > 20 million silks per U.S. maize acre.
Eman M. Khalaf, Anuja Shrestha, Jeffrey Rinne, Michael D. J. Lynch, Charles R. Shearer, Victor Limay-Rios, Lana M. Reid, Manish N. Raizada   +7 more
doaj   +1 more source