Results 81 to 90 of about 24,510 (223)

Five new mitogenomes sequences of Calidridine sandpipers (Aves: Charadriiformes) and comparative mitogenomics of genus Calidris

PeerJ, 2022
Background The genus Calidris (Charadriiformes, Scolopacidae) includes shorebirds known as dunlin, knots, and sanderlings. The relationships between species nested within Calidris, including Eurynorynchus, Limicola and Aphriza, are not well-resolved. Methods Samples were collected from Xiaoyangkou, Rudong County, Jiangsu Province, China. Mitogenomes
Wan Chen, Keer Miao, Junqi Wang, Hao Wang, Wan Sun, Sijia Yuan, Site Luo, Chaochao Hu, Qing Chang   +8 more
openaire   +3 more sources

Comparative analysis of the chloroplast and mitochondrial genomes of Saposhnikovia divaricata revealed the possible transfer of plastome repeat regions into the mitogenome

BMC Genomics, 2022
Background Saposhnikovia divaricata (Turcz.) Schischk. is a perennial herb whose dried roots are commonly used as a source of traditional medicines.
Yang Ni, Jingling Li, Haimei Chen, Jingwen Yue, Pinghua Chen, Chang Liu   +5 more
doaj   +1 more source

Equipped for success: genomes and metabolomes of the European Amanita muscaria are conserved in its novel South African range

New Phytologist, EarlyView.
Summary Plants and soils have been moved around the world for centuries, but invasive mushrooms receive scant attention. The Amanita muscaria species complex was introduced to South Africa in the context of forestry, but its origins, ecology and recent evolution are unstudied. We sequenced the genomes of 24 Northern and Southern Hemisphere A. muscaria,
Grant R. Nickles, Cecelia K. Stokes, Deborah L. Narh, Kira M. T. Lynn, Savannah R. Fuqua, Corbin Bryan, Brooke M. Allen, Christopher P. Bivins, Jin Woo Bok, J. Stephen Brewer, Sikelela T. Buthelezi, Jahiya P. R. M. Clark, Kerri L. Coon, Lauren R. Corby, Martin P. A. Coetzee, Claudette Dewing, Tuan A. Duong, Mathew A. Harris, Nancy P. Keller, Katlego Kopotsa, Frances A. Lane, Holly L. Nichols, Alandie Nieuwoudt, Martin A. Nuñez, Miguel E. Medina Munoz, Sung Chul Park, Nam Q. Pham, Kaetlyn T. Ryan, Myriam Solís, Rytas Vilgalys, Jasmine Marea Wallace, Yen‐Wen Wang, Brenda D. Wingfield, Michael J. Wingfield, Travis K. Worley, Taylor A. Zallek, Mostafa Zamanian, Jason D. Hoeksema, Milton T. Drott, Anne Pringle   +39 more
wiley   +1 more source

The complete mitochondrial genome of the sea urchin, Echinometra sp. EZ

Mitochondrial DNA. Part B. Resources, 2018
The complete mitogenome of Echinometra sp. EZ has been described and fully annotated in this study. Phylogenetic analysis of cytochrome c oxidase subunit I (COI) from six Echinometra species confirms that our sample is E. sp. EZ. The mitogenome is 15,698 
Remi N. Ketchum, Melissa B. DeBiasse, Joseph F. Ryan, John A. Burt, Adam M. Reitzel   +4 more
doaj   +1 more source

Assembly and comparative analysis of the first complete mitochondrial genome of Acer truncatum Bunge: a woody oil-tree species producing nervonic acid

BMC Plant Biology, 2022
Background Acer truncatum (purpleblow maple) is a woody tree species that produces seeds with high levels of valuable fatty acids (especially nervonic acid).
Qiuyue Ma, Yuxiao Wang, Shushun Li, Jing Wen, Lu Zhu, Kunyuan Yan, Yiming Du, Jie Ren, Shuxian Li, Zhu Chen, Changwei Bi, Qianzhong Li   +11 more
doaj   +1 more source

Mitochondrial genome evolution in Alismatales: Size reduction and extensive loss of ribosomal protein genes [PDF]

, 2017
The order Alismatales is a hotspot for evolution of plant mitochondrial genomes characterized by remarkable differences in genome size, substitution rates, RNA editing, retrotranscription, gene loss and intron loss.
Barrett, Craig F., Cuenca, Argelia, Davis, Jerrold I., Graham, Sean W., Mishmar, Dan, Petersen, Gitte, Ross, Gregory T., Seberg, Ole, Zervas, Athanasios   +8 more
core   +4 more sources

A Targeted BLAST‐CAP3 Workflow for Rapid and Reproducible Mitochondrial Gene Assembly From Public Transcriptomes: Acheta domesticus as a Model

Natural Sciences, Volume 6, Issue 2, April 2026.
A streamlined transcriptome‐based workflow is presented for rapid and reproducible assembly of the mitochondrial COX1 gene. RNA‐Seq datasets are filtered using BLAST to extract target reads, followed by de novo assembly with CAP3 and validation via ClustalW and BLASTn.
Yash Munnalal Gupta
wiley   +1 more source

Complete mitochondrial genome of the ambush bug, Amblythyreus gestroi (Hemiptera: Reduviidae)

Mitochondrial DNA. Part B. Resources, 2018
The mitochondrial genome (mitogenome) of Amblythyreus gestroi is described in the present paper. The complete mitogenome is a 15,228 bp circular DNA molecule, containing 13 protein-coding genes, 22 tRNA genes, two rRNA genes and a control region.
Zhuo Chen, Fan Song, Wanzhi Cai
doaj   +1 more source

Sequence and organization of the complete mitochondrial genome of the blackfly Simulium variegatum (Diptera: Simuliidae) [PDF]

, 2016
The complete mitochondrial genome of the European blackfly, Simulium variegatum Meigen, 1818 was sequenced using a combined Illumina and Sanger sequencing approach.
Day, John C., Gweon, Hyun S., Post, Rory J.   +2 more
core   +2 more sources

Reliable Inference of Phylogenomic Relationship via Assembly‐Based Strategy Accommodating Raw Reads and Proteins

Molecular Ecology Resources, Volume 26, Issue 3, April 2026.
ABSTRACT Phylogenomics is a transformative approach in systematics, conservation biology, and biomedical research, enabling the inference of evolutionary relationships by leveraging hundreds to thousands of genes from genomic or transcriptomic data. However, acquiring high‐quality genomes and transcriptomes necessitates samples with intact DNA and RNA,
Yunlong Li, Xu Liu, Chong Chen, Jian‐Wen Qiu, Kevin M. Kocot, Jin Sun   +5 more
wiley   +1 more source