Results 41 to 50 of about 2,644,529 (258)

Emerging experimental and computational methods for studying redox‐regulated structural transitions

open access: yesFEBS Letters, EarlyView.
Redox reactions can reshape proteins and alter how they behave in cells, with important consequences for health and disease. This review explores emerging experimental and computational approaches for discovering these redox‐sensitive protein switches, revealing their structural effects, and predicting their behavior, opening new opportunities to ...
Tasneem Rass   +2 more
wiley   +1 more source

$\mathcal{B}$-Partitions, determinant and permanent of graphs [PDF]

open access: yesTransactions on Combinatorics, 2018
Let $G$ be a graph (directed or undirected) having $k$ number of blocks $B_1, B_2,\hdots,B_k$. A $\mathcal{B}$-partition of $G$ is a partition consists of $k$ vertex-disjoint subgraph $(\hat{B_1},\hat{B_1},\hdots,\hat{B_k})$ such that $\hat{B}_i$ is an ...
Ranveer Singh, Ravindra Bapat
doaj   +1 more source

Functional comparison of EncB and EncC cargo proteins in iron storage within the Myxococcus xanthus encapsulin

open access: yesFEBS Letters, EarlyView.
Encapsulins are protein nanocompartments that play an important role in iron storage. In the Myxococcus xanthus encapsulin system, two cargo proteins called EncB and EncC contribute to iron mineralization. Here, we show that EncB and EncC generate iron‐containing minerals with distinct chemical compositions, suggesting that the composition of stored ...
Harry B. McDowell   +2 more
wiley   +1 more source

Evolutionary Games of Multiplayer Cooperation on Graphs. [PDF]

open access: yesPLoS Computational Biology, 2016
There has been much interest in studying evolutionary games in structured populations, often modeled as graphs. However, most analytical results so far have only been obtained for two-player or linear games, while the study of more complex multiplayer ...
Jorge Peña   +3 more
doaj   +1 more source

Neutralization of the PTX3/CD44 axis suppresses TGF‐β1 signaling in kidney fibrosis

open access: yesFEBS Letters, EarlyView.
This study investigates how the PTX3/CD44 axis promotes kidney fibrosis by activating TGF‐β1 signaling. We demonstrate that the neutralizing antibody WHC‐001 effectively inhibits this pathway, suppressing myofibroblast activation and partial epithelial–mesenchymal transition (EMT).
Chao‐Chun Cheng   +8 more
wiley   +1 more source

An upper bound for the largest singular value of extended mixed graphs

open access: yesExamples and Counterexamples
An extended mixed graph contains edges declared to be either positive, or negative, or oriented from one end to the other. They unify concepts of mixed graphs, signed graphs, oriented graphs and ordinary graphs.
Zoran Stanić
doaj   +1 more source

On Mixed Metric Dimension of Some Path Related Graphs

open access: yesIEEE Access, 2020
A vertex $k\in V_{G}$ determined two elements (vertices or edges) $\ell,m \in V_{G}\cup E_{G}$ , if $d_{G}(k,\ell)\neq d_{G}(k,m)$ . A set $R_ {\text {m}}$ of vertices in a graph $G$ is a mixed metric generator for $G$ , if two distinct elements
Hassan Raza, Ying Ji, Shaojian Qu
doaj   +1 more source

Incidence matrices and line graphs of mixed graphs

open access: yes, 2022
In the theory of line graphs of undirected graphs there exists an important theorem linking the incidence matrix of the root graph to the adjacency matrix of its line graph. For directed or mixed graphs, however, the exists no analogous result.
Alomari, Omar   +2 more
core  

Sequence mixed graphs [PDF]

open access: yes, 2016
A mixed graph can be seen as a type of digraph containing some edges (or two opposite arcs). Here we introduce the concept of sequence mixed graphs, which is a generalization of both sequence graphs and literated line digraphs.
Dalfó Simó, Cristina   +2 more
core   +1 more source

Inhibition of dipeptidyl peptidase 7 impairs lysophagy in LLOMe‐treated HepG2 cells

open access: yesFEBS Letters, EarlyView.
DPP7 inhibition delays ubiquitin‐dependent lysophagy by attenuating ubiquitin accumulation and the recruitment of SQSTM1 and LC3 to damaged lysosomes, resulting in delayed clearance of damaged lysosomes and impaired restoration of lysosomal homeostasis. Created using FigureLabs (Certificate ID: FL‐PUB‐20260922‐Z99XNX).
Na Yeon Park   +8 more
wiley   +1 more source

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