Results 11 to 20 of about 66,327 (247)

Serotyping, MLST, and Core Genome MLST Analysis of Salmonella enterica From Different Sources in China During 2004–2019 [PDF]

Frontiers in Microbiology, 2021
Salmonella enterica (S. enterica) is an important foodborne pathogen, causing food poisoning and human infection, and critically threatening food safety and public health.
Shigan Yan, Wencheng Zhang, Chengyu Li, X. Liu, Liping Zhu, Leilei Chen, Baowei Yang   +6 more
semanticscholar   +4 more sources

Comparing Core-genome MLST with PFGE and MLST for cluster analysis of Carbapenem-resistant Acinetobacter baumannii.

Journal of Global Antimicrobial Resistance, 2022
OBJECTIVES Carbapenem-resistant Acinetobacter baumannii (CRAB) is a prevalent pathogen contributing to hospital infections. Pulsed-field gel electrophoresis, multilocus sequence typing and core-genome MLST are frequently used methods to illuminate the ...
Tingting Li, Yunxing Yang, R. Yan, Peng Lan, Haiyang Liu, Ying Fu, X. Hua, Yan Jiang, Zhihui Zhou, Yunsong Yu   +9 more
semanticscholar   +4 more sources

The heterogeneity, distribution and environmental associations of Borrelia burgdorferi sensu lato, the agent of Lyme borreliosis, in Scotland [PDF]

Frontiers in Public Health, 2014
Lyme borreliosis is an emerging infectious humandisease caused by the Borrelia burgdorferi sensu lato complex of bacteria with reported cases increasing in many areas of Europe and North America.
Marianne eJames, Lucy eGilbert, Alan eBowman, Ken eForbes   +3 more
doaj   +6 more sources

MentaLiST – A fast MLST caller for large MLST schemes

Microbial Genomics, 2017
MLST (multi-locus sequence typing) is a classic technique for genotyping bacteria, widely applied for pathogen outbreak surveillance. Traditionally, MLST is based on identifying sequence types from a set of a small number of housekeeping genes.
Pedro Feijão, Hua-Ting Yao, Daniel Fornika, J. Gardy, William W. L. Hsiao, C. Chauve, L. Chindelevitch   +6 more
semanticscholar   +5 more sources

MLVA and MLST typing of Brucella from Qinghai, China [PDF]

Infectious Diseases of Poverty, 2016
BackgroundThe Qinghai-Tibet Plateau (QTP) of China is an extensive pastoral and semi-pastoral area, and because of poverty and bad hygiene conditions, Brucella is highly prevalent in this region.
Jun-Ying Ma, Hu Wang, Xuefei Zhang, Li-qing Xu, Gui-ying Hu, Hai Jiang, Fang Zhao, Hong-yan Zhao, D. Piao, Yumin Qin, B. Cui, G. Lin   +11 more
semanticscholar   +3 more sources

Revisiting Bartonella bacilliformis MLST.

Infection, Genetics and Evolution, 2018
All the studies published including Bartonella bacilliformis MLST data, as well as all B. bacilliformis genomes present in GenBank were analyzed. Overall 64 isolates and their geographical distribution were analyzed, and 14 different MLST patterns were ...
J. Ruiz, M. J. Pons
semanticscholar   +3 more sources

Wolbachia and DNA barcoding insects: patterns, potential and problems [PDF]

, 2012
Wolbachia is a genus of bacterial endosymbionts that impacts the breeding systems of their hosts. Wolbachia can confuse the patterns of mitochondrial variation, including DNA barcodes, because it influences the pathways through which mitochondria are ...
BC Schmidt, BL Fisher, Brian L. Fisher, CC Nice, Claudia Bertrand, Cory Sheffield, D Steinke, DA Grasso, Da-Wei Huang, Daniel H. Janzen, DD Shoemaker, DH Janzen, Dirk Steinke, Donald Quicke, Eldon S. Eveleigh, ER Swartz, FM Jiggins, GDD Hurst, HR Braig, I Meusnier, J Engelstadter, J Fernandez Triana, J Fernandez Triana, J Ferrari, J Rozas, JA Russell, James Whitfield, Jan Hrcek, Jason Gibbs, Jonathan H. Badger, Jose Fernandez-Triana, Josephine Rodriguez, Julie K. Stahlhut, JWO Ballard, K Hilgenboecker, Kate Crosby, Katharine Hind, L Baldo, L Baldo, L Excoffier, LA Weinert, Laurence Packer, LL Chen, M Virgilio, M. Alex Smith, MA Smith, MA Smith, MA Smith, MA Smith, MA Smith, MA Smith, Mark R. Shaw, MC Linares, Mehrdad Hajibabaei, Milan Janda, Monty Wood, NV Ivanova, PDN Hebert, PDN Hebert, R Raychoudhury, R Raychoudhury, RA Johnstone, Rodolphe Rougerie, RS Rasmussen, S Ratnasingham, Scott E. Miller, SL Dobson, Sujeevan Ratnasingham, T Wenseleers, TL Whitworth, Winnie Hallwachs, X-J Sun, Xin Zhou, Yanwei Li, YW Li, Z Gompert   +75 more
core   +19 more sources

Rapid Typing of Extended-Spectrum β-Lactamase (ESBL)- and Metallo-β-Lactamase (MBL)-Producing Enterobacterales Using Fourier Transform Infrared (FT-IR) Spectroscopy. [PDF]

Microbiologyopen
Clinical isolates of Klebsiella pneumoniae and Enterobacter cloacae complex were analyzed using FT‐IR spectroscopy and genotyping methods. High concordance was observed, demonstrating the potential of FT‐IR spectroscopy as a rapid screening tool.
Kawamoto Y, Kosai K, Murata M, Ota K, Mitsumoto-Kaseida F, Kaku N, Hasegawa H, Izumikawa K, Mukae H, Yanagihara K.   +9 more
europepmc   +2 more sources

Genetic Diversity and Population Structure of the pv. Strains Affecting Cabbages in China Revealed by MLST and Rep-PCR Based Genotyping [PDF]

The Plant Pathology Journal, 2021
Xanthomonas campestris pv. campestris (Xcc) is the causal agent of black rot for cruciferous vegetables worldwide, especially for the cole crops such as cabbage and cauliflower.
Guo Chen, Congcong Kong, Limei Yang, Mu Zhuang, Yangyong Zhang, Yong Wang, Jialei Ji, Zhiyuan Fang, Honghao Lv   +8 more
doaj   +1 more source

Prevalence and population biology of mastitis-causing Streptococcus uberis using an MLST based approach

Journal of Advanced Biotechnology and Experimental Therapeutics, 2021
Streptococcus uberis is a predominant pathogen in both clinical and subclinical varieties of bovine mastitis. The genetic and evolutionary relationships among S. uberis strains from different countries are poorly understood.
Aura Rahman, Arittra Bhattacharjee, Tahmina Tabassum, Mohammad Ariful Islam, Maqsud Hossain   +4 more
doaj   +1 more source