Results 11 to 20 of about 39,964 (225)

MentaLiST – A fast MLST caller for large MLST schemes [PDF]

Microbial Genomics, 2017
MLST (multi-locus sequence typing) is a classic technique for genotyping bacteria, widely applied for pathogen outbreak surveillance. Traditionally, MLST is based on identifying sequence types from a small number of housekeeping genes.
Gardy, Jennifer, Leonid Chindelevitch, William Hsiao, Chauve, Cedric, Pedro Feijao, Cedric Chauve, Yao, Hua-Ting, Jennifer Gardy, Hsiao, William, Fornika, Dan, Dan Fornika, Hua-Ting Yao, Feijao, Pedro, Chindelevitch, Leonid   +13 more
core   +5 more sources

Multilocus Sequence Typing (MLST) of Chlamydiales

, 2019
Developed two decades ago as a molecular method to provide definite characterization of a bacterial isolate, Multilocus Sequence Typing (MLST) is today globally adopted as a universal fine-detailed molecular typing tool and has been applied to numerous ...
Polkinghorne, Adam, Adam Polkinghorne, Yvonne Pannekoek, Jelocnik, Martina, Pannekoek, Yvonne, Martina Jelocnik   +5 more
core   +3 more sources

S8.5c MLST genotyping and phylogenetics of AD-hybrids

Medical Mycology, 2022
S8.5 GENOTYPING OF CRYPTOCOCCUS NEOFORMANS AND C. GATTII, SEPTEMBER 23, 2022, 3:00 PM - 4:30 PM:   OBJECTIVES: In a previous study a set of new molecular-type specific primers were designed to apply the standard ISHAM consensus multi-locus sequence ...
Bertout, Sébastien, Chung, June Kwon, Silva, Joao Inacio, Yang, Dong-Hoon, Puime, Andrés, Hitchcock, Megan, Florek, Magdalena, Escandon, Patricia, Roger, Frederic, Cogliati, Massimo, Nawrot, Urszula, Chen, Min, Rickerts, Volker, Ollivier, Marie Desnos, Xu, Jianping, Meyer, Wieland   +15 more
core   +2 more sources

Multilocus sequence typing (MLST) for characterization of Enterobacter cloacae.

PLoS ONE, 2013
Enterobacter cloacae is an important emerging pathogen, which sometime causes respiratory infection, surgical site infection, urinary infection, sepsis, and outbreaks at neonatal units.
Masahiro Shimojima, Teruo Kirikae, Kayoko Hayakawa, Tohru Miyoshi-Akiyama, Norio Ohmagari   +4 more
core   +5 more sources

Automation of MLST using third-generation liquid-handling technology

Molecular Biotechnology, 2006
The molecular characterization of bacterial pathogens of clinical significance is increasingly important. Methods, such as multilocus sequence typing (MLST), allow bacterial strains to be characterized during case clusters, for antibiotic-resistant ...
Jefferies, J.M.C., Diggle, M.A., Clarke, S.C., Sullivan, C.B.   +3 more
core   +4 more sources

Core Genome MLST for Source Attribution of Campylobacter coli [PDF]

Frontiers in Microbiology, 2021
Campylobacter species are among the leading foodborne bacterial agents of human diarrheal illness. The majority of campylobacteriosis has been attributed to Campylobacter jejuni (85% or more), followed by Campylobacter coli (5–10%). The distribution of C. jejuni and C.
Harrison, Lucas, Mukherjee, Sampa, Hsu, Chih-Hao, Young, Shenia, Strain, Errol, Zhang, Qijing, Tillman, Glenn E., Morales, Cesar, Haro, Jovita, Zhao, Shaohua   +9 more
openaire   +4 more sources

Identification and validation of two peptide markers for the recognition of Clostridioides difficile MLST-1 and MLST-11 by MALDI-MS [PDF]

Clinical Microbiology and Infection, 2019
Clostridioides difficile infection (CDI) has become the main cause of nosocomial infective diarrhoea. To survey and control the spread of different C. difficile strains, there is a need for suitable rapid tests. The aim of this study was to identify peptide/protein markers for the rapid recognition of C.
Corver, J., Sen, J., Hornung, B.V.H., Mertens, B.J., Berssenbrugge, E.K.L., Harmanus, C., Sanders, I.M.J.G., Kumar, N., Lawley, T.D., Kuijper, E.J., Hensbergen, P.J., Nicolardi, S.   +11 more
openaire   +3 more sources

Antibiotic Resistance and Biofilm Gene Distribution in Colistin-Resistant Acinetobacter baumannii. [PDF]

Microbiologyopen
Multicenter analysis of 144 clinical Acinetobacter baumannii isolates in Iran revealed high MDR/XDR rates and widespread biofilm formation (90.9%). Colistin resistance was linked to pmrAB overexpression, while blaPER‐1 was independently associated with strong biofilm production, highlighting chromosomal resistance mechanisms and biofilm as key drivers ...
Hatem ZA, Kafe FN, Musa FH, Al-Taie SF, Ateya NH, Aziz LM, Rajabi E, Hasan RN.   +7 more
europepmc   +2 more sources

Cronobacter, the emergent bacterial pathogen Enterobacter sakazakii comes of age; MLST and whole genome sequence analysis [PDF]

, 2014
Background: Following the association of Cronobacter spp. to several publicized fatal outbreaks in neonatal intensive care units of meningitis and necrotising enterocolitis, the World Health Organization (WHO) in 2004 requested the establishment of a ...
Keith A Jolley, Forsythe, SJ, Stephen J Forsythe, Jolley, KA, Benjamin Dickins, Dickins, B   +5 more
core   +1 more source

Multilocus sequence typing (MLST) for lineage assignment and high resolution diversity studies in Trypanosoma cruzi. [PDF]

, 2011
BACKGROUND: Multilocus sequence typing (MLST) is a powerful and highly discriminatory method for analysing pathogen population structure and epidemiology. Trypanosoma cruzi, the protozoan agent of American trypanosomiasis (Chagas disease), has remarkable
Michael A. Miles, Acosta , N,, Llewellyn Martin S., Nidia Acosta, Louisa A Messenger, Acosta Nidia, Bhattacharyya Tapan, Carrasco, Hernan J, Yeo, Matthew, Hernan J Carrasco, Bhattacharyya , T,, Miles, Michael A., Llewellyn , MS,, Isabel L. Mauricio, Yeo Matthew, Miles, M.A., Michael D Lewis, Messenger, Louisa A, Yeo, M., Acosta, N., Mauricio, Isabel Larguinho, Matthew Yeo, Patricio Diosque, Llewellyn, Martin S, Martin S Llewellyn, Miles, Michael A, Lewis, M.D., Messenger Louisa A., Diosque, P., Lewis, Michael D, Miles , MA., Carrasco Hernan J., Llewellyn, Martin S., Llewellyn, M.S., Lewis Michael D., Messenger, L.A., Acosta, Nidia, Lewis, Michael D., Carrasco, H.J., Mauricio, I.L., Mauricio, Isabel L., Messenger, Loisa A., Lewis , MD,, Yeo , M,, Michael A Miles, Miles Michael A., Bhattacharyya, Tapan, Louisa A. Messenger, Carrasco , HJ,, Messenger , LA,, Isabel L Mauricio, Bhattacharyya, T., Diosque Patricio, Hernan J. Carrasco, Martin S. Llewellyn, Diosque, Patricio, Michael D. Lewis, Mauricio, Isabel L, Mauricio Isabel L., Diosque , P,, Tapan Bhattacharyya, Carrasco, Hernán J.   +61 more
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