Results 11 to 20 of about 2,051,496 (327)

Molecular Network Control Through Boolean Canalization [PDF]

EURASIP Journal on Bioinformatics and Systems Biology, 2015
Boolean networks are an important class of computational models for molecular interaction networks. Boolean canalization, a type of hierarchical clustering of the inputs of a Boolean function, has been extensively studied in the context of network ...
Dimitrova, Elena S., Murrugarra, David
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Molecular networks in Network Medicine: Development and applications [PDF]

WIREs Systems Biology and Medicine, 2020
AbstractNetwork Medicine applies network science approaches to investigate disease pathogenesis. Many different analytical methods have been used to infer relevant molecular networks, including protein–protein interaction networks, correlation‐based networks, gene regulatory networks, and Bayesian networks.
Silverman, Edwin K., Schmidt, Harald H. H. W., Anastasiadou, Eleni, Altucci, Lucia, Angelini, Marco, Badimon, Lina, Balligand, Jean‐Luc, Benincasa, Giuditta, Capasso, Giovambattista, Conte, Federica, Di Costanzo, Antonella, Farina, Lorenzo, Fiscon, Giulia, Gatto, Laurent, Gentili, Michele, Loscalzo, Joseph, Marchese, Cinzia, Napoli, Claudio, Paci, Paola, Petti, Manuela, Quackenbush, John, Tieri, Paolo, Viggiano, Davide, Vilahur, Gemma, Glass, Kimberly, Baumbach, Jan   +25 more
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Functional Molecular Ecological Networks [PDF]

mBio, 2010
ABSTRACT Biodiversity and its responses to environmental changes are central issues in ecology and for society. Almost all microbial biodiversity research focuses on “species” richness and abundance but not on their interactions. Although a network approach is powerful in describing ecological interactions among species, defining
Jizhong Zhou, Ye Deng, Feng Luo, Zhili He, Qichao Tu, Xiaoyang Zhi   +5 more
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Molecular ecological network analyses [PDF]

BMC Bioinformatics, 2012
AbstractBackgroundUnderstanding the interaction among different species within a community and their responses to environmental changes is a central goal in ecology. However, defining the network structure in a microbial community is very challenging due to their extremely high diversity and as-yet uncultivated status.
Deng Ye, Jiang Yi-Huei, Yang Yunfeng, He Zhili, Luo Feng, Zhou Jizhong   +5 more
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VOLTA: adVanced mOLecular neTwork Analysis

Bioinformatics, 2021
Abstract Motivation Network analysis is a powerful approach to investigate biological systems. It is often applied to study gene co-expression patterns derived from transcriptomics experiments.
Alisa Pavel, Antonio Federico, Giusy del Giudice, Angela Serra, Dario Greco   +4 more
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Identification of the global miR-130a targetome reveals a role for TBL1XR1 in hematopoietic stem cell self-renewal and t(8;21) AML

Cell Reports, 2022
Summary: Gene expression profiling and proteome analysis of normal and malignant hematopoietic stem cells (HSCs) point to shared core stemness properties.
Gabriela Krivdova, Veronique Voisin, Erwin M. Schoof, Sajid A. Marhon, Alex Murison, Jessica L. McLeod, Martino M. Gabra, Andy G.X. Zeng, Stefan Aigner, Brian A. Yee, Alexander A. Shishkin, Eric L. Van Nostrand, Karin G. Hermans, Aaron C. Trotman-Grant, Nathan Mbong, James A. Kennedy, Olga I. Gan, Elvin Wagenblast, Daniel D. De Carvalho, Leonardo Salmena, Mark D. Minden, Gary D. Bader, Gene W. Yeo, John E. Dick, Eric R. Lechman   +24 more
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Molecular signatures of attention networks

Human Brain Mapping, 2023
Abstract Attention network theory proposes three distinct types of attention—alerting, orienting, and control—that are supported by separate brain networks and modulated by different neurotransmitters, that is, norepinephrine, acetylcholine, and dopamine.
Hanna Schindler, Philippe Jawinski, Aurina Arnatkevičiūtė, Sebastian Markett   +3 more
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Evaluation and Comparison of Dermo-Cosmetic Activities of Three Oak Species by Targeting Antioxidant Metabolites and Skin Enzyme Inhibitors

Metabolites, 2023
The two main species, sessile oak (Quercus petraea Liebl.) and pedunculate oak (Quercus robur L.), predominant in French forests, are mainly used for aging wines and spirits; however, the potential of oak wood extract as a source of natural antioxidants,
Gaëlle Buche, Malorie Laffon, Laëtitia Fougère, Emilie Destandau   +3 more
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Unifying the essential concepts of biological networks: biological insights and philosophical foundations [PDF]

, 2020
Over the last decades, network-based approaches have become highly popular in diverse fields of biology, including neuroscience, ecology, molecular biology and genetics.
Hilgetag, Claus, Kostic, Daniel, Tittgemeyer, Marc   +2 more
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Chemical Composition of Leaves, Stem, and Roots of Peperomia pellucida (L.) Kunth

Molecules, 2022
Peperomia pellucida is a species known in the Amazon as “erva-de-jabuti” that has been used in several therapeutic applications based on folk medicine.
Paulo Wender P. Gomes, Hugo Barretto, José Diogo E. Reis, Abraão Muribeca, Alice Veloso, Carlos Albuquerque, Andrew Teixeira, Wandson Braamcamp, Sônia Pamplona, Consuelo Silva, Milton Silva   +10 more
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