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Molecular Identification, Transcriptome Sequencing and Functional Annotation of Pulex irritans

Acta Parasitologica, 2021
Pulex irritans are vectors of various zoonotic pathogens. However, molecular studies on P. irritans and flea-borne diseases are limited due to the lack of molecular data. This study aimed to conduct transcriptome sequencing, functional annotation, and pathogen analysis of P.
Li Hu   +5 more
openaire   +2 more sources

Functional annotation of expressed sequence tags as a tool to understand the molecular mechanism controlling flower bud development in tree peony

Physiologia Plantarum, 2009
Tree peony (Paeonia suffruticosaAndrews) is an important medicinal and ornamental plant. In China, its root bark is an important ingredient for traditional Chinese medicine. It is valued as an ornamental plant because its flower shows a wide variation in shape and color.
Qing Y, Shu   +8 more
openaire   +2 more sources

De novo assembly, gene annotation, and molecular marker development using Illumina paired-end transcriptome sequencing in the clam Saxidomus purpuratus

Genes & Genomics, 2017
The clam Saxidomus purpuratus is an important economic marine bivalve species in China. In this study, we performed a de novo transcriptome sequencing of S. purpuratus gill tissues to generate a transcriptome dataset by performing Illumina paired-end sequencing on the HiSeq 2500 platform. A total of 10,488,024 raw reads were produced.
Hongjun Li, Min Liu, Sheng Ye, Feng Yang
openaire   +1 more source

Automated sequence-based annotation and interpretation of the human genome

Nature Genetics, 2022
Anshul Kundaje   +2 more
exaly  

Bakta: rapid and standardized annotation of bacterial genomes via alignment-free sequence identification

Microbial Genomics, 2021
Oliver Schwengers   +2 more
exaly  

Barapost: Binning of Nucleotide Sequences According to Taxonomic Annotation

IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2021
Maxim A Sikolenko, Leonid Valentovich
exaly  

Genome annotation: man versus machine

Nature Reviews Microbiology, 2010
Nicola K Petty
exaly  

Functional annotation of noncoding sequence variants

Nature Methods, 2014
Graham R S Ritchie   +2 more
exaly  

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