Extended-spectrum beta-lactamases-producing Escherichia coli in common vampire bats Desmodus rotundus and livestock in Peru [PDF]
, 2018 Antibiotic resistance mediated by bacterial production of extended‐spectrum beta‐lactamase (ESBL) is a global threat to public health. ESBL resistance is most commonly hospital‐acquired; however, infections acquired outside of hospital settings have ...
A. Appelgren +9 more
core +3 more sources
Multilocus Sequence Typing of Pathogenic Candida Species [PDF]
Eukaryotic Cell, 2008 Typing strains within a microbial species on the basis of DNA sequences at multiple loci has greatly advanced study of the epidemiology and evolutionary phylogenetics of many bacterial ([9][1], [40][2], [60][3], [72][4]) and fungal ([26][5], [68][6]) pathogens. Multilocus sequence typing (MLST)
Frank C, Odds, Mette D, Jacobsen
openaire +2 more sources
Short read sequence typing (SRST): multi-locus sequence types from short reads
BMC Genomics, 2012 Background Multi-locus sequence typing (MLST) has become the gold standard for population analyses of bacterial pathogens. This method focuses on the sequences of a small number of loci (usually seven) to divide the population and is simple, robust and ...
Inouye Michael +3 more
doaj +1 more source
Using BOX-PCR to exclude a clonal outbreak of melioidosis
BMC Infectious Diseases, 2007 Background Although melioidosis in endemic regions is usually caused by a diverse range of Burkholderia pseudomallei strains, clonal outbreaks from contaminated potable water have been described. Furthermore B. pseudomallei is classified as a CDC Group B
Ward Linda +6 more
doaj +1 more source
Oral candidiasis and molecular epidemiology of Candida glabrata [PDF]
, 2014 A description of the human infection oral candidiasis, and a study in molecular epidemiology of the yeast fungus Candida glabrata, using multilocus sequence typing (MLST)
Vikholt, Katharina Johnsen
core
Discrete typing units of Trypanosoma cruzi identified in rural dogs and cats in the humid Argentinean Chaco [PDF]
, 2012 The discrete typing units (DTUs) of Trypanosoma cruzi that infect domestic dogs and cats have rarely been studied. With this purpose we conducted a cross-sectional xenodiagnostic survey of dog and cat populations residing in 2 infested rural villages in ...
Cardinal, Marta Victoria +5 more
core +1 more source
Burkholderia pseudomallei in Unchlorinated Domestic Bore Water, Tropical Northern Australia
Emerging Infectious Diseases, 2011 To determine whether unchlorinated bore water in northern Australia contained Burkholderia pseudomallei organisms, we sampled 55 bores; 18 (33%) were culture positive. Multilocus sequence typing identified 15 sequence types. The B.
Mark Mayo +9 more
doaj +1 more source
Comparison and molecular characterization of animal and human Clostridium difficile strains [PDF]
, 2014 The main objective of this study was to characterize and compare animal and human C. difficile strains with respect to the PCR-ribotype and the antibiotic resistance.
Avesani, Véronique +6 more
core
Outbreak Of NDM-1-producing Klebsiella Pneumoniae In A Neonatal Unit In Colombia [PDF]
, 2013 Six multiresistant, NDM-1-producing Klebsiella pneumoniae strains were recovered from an outbreak that affected six neonatal patients in a Colombian hospital. Molecular analysis showed that all of the isolates harbored the blaNDM-1, qnrA, and intI1 genes
Aguilar, M +9 more
core +1 more source
Phylogeny and Disease Association of Shiga Toxin–producing Escherichia coli O91
Emerging Infectious Diseases, 2009 The diversity and relatedness of 100 Shiga toxin–producing Escherichia coli O91 isolates from different patients were examined by multilocus sequence typing. We identified 10 specific sequence types (ST) and 4 distinct clonal groups.
Alexander Mellmann +8 more
doaj +1 more source