Results 21 to 30 of about 55,602 (251)

Antimicrobial Resistance Profile, Whole-Genome Sequencing and Core Genome Multilocus Sequence Typing of B. anthracis Isolates in Croatia from 2001 to 2022. [PDF]

Antibiotics (Basel)
Kompes G, Duvnjak S, Reil I, Mihaljević Ž, Habrun B, Benić M, Cvetnić L, Špičić S, Bagarić A.   +8 more
europepmc   +3 more sources

Molecular Markers Reveal Epidemiological Patterns and Evolutionary Histories of the Human Pathogenic Cryptococcus

Frontiers in Cellular and Infection Microbiology, 2021
The human pathogenic Cryptococcus species are the main agents of fungal meningitis in humans and the causes of other diseases collectively called cryptococcosis.
Nan Hong, Nan Hong, Min Chen, Jianping Xu   +3 more
doaj   +1 more source

Phylogeny of Flavobacteria Group Isolated from Freshwater Using Multilocus Sequencing Analysis [PDF]

Genomics & Informatics, 2013
Sequence analysis of the 16S rRNA gene has been widely used for the classification of microorganisms. However, we have been unable to clearly identify five Flavobacterium species isolated from a freshwater by using the gene as a single marker, because ...
Seyoung Mun, Jungnam Lee, Siwon Lee, Kyudong Han, Tae-Young Ahn   +4 more
doaj   +1 more source

Advances in Traceability Typing and Identification of Foodborne Pathogens

Shipin gongye ke-ji, 2022
Foodborne pathogens are the main factors affecting food quality and safety. Timely and accurate strain typing data enable rapid detection of outbreak clusters, informing ongoing infection control and public health responses, which are important for ...
Yao LIU, Yuanmiao WEI, Ling LI, Lunzhao YI, Weiwei ZHAO, Ying SHANG, Jianxin CAO   +6 more
doaj   +1 more source

Multilocus sequence typing of Propionibacterium freudenreichii [PDF]

International Journal of Food Microbiology, 2011
Propionibacterium freudenreichii is used as a ripening culture in Swiss cheese manufacture. This study investigates the molecular diversity and the population structure of this bacterium via multilocus sequence typing (MLST). Internal fragments of seven genes sequenced for 113 strains of different subspecies and origins allowed the resolution of 46 ...
Dalmasso, Marion, Nicolas, Pierre, Falentin, Hélène, Valence, Florence, Tanskanen, Jarna, Jatila, Hanna, Salusjärvi, Tuomas, Thierry, Anne   +7 more
openaire   +6 more sources

The multilocus sequence typing network: mlst.net [PDF]

Nucleic Acids Research, 2005
The unambiguous characterization of strains of a pathogen is crucial for addressing questions relating to its epidemiology, population and evolutionary biology. Multilocus sequence typing (MLST), which defines strains from the sequences at seven house-keeping loci, has become the method of choice for molecular typing of many bacterial and fungal ...
Aanensen, DM, Spratt, BG
openaire   +4 more sources

Multilocus sequence typing of Mycoplasma agalactiae [PDF]

Journal of Medical Microbiology, 2011
Mycoplasma agalactiae is the main cause of contagious agalactia, a serious disease of sheep and goats, which has major clinical and economic impacts. We have developed a multilocus sequence typing (MLST) scheme using the sequenced genomes of the M. agalactiae strains PG2 and 5632.
L, McAuliffe, F, Gosney, M, Hlusek, M L, de Garnica, J, Spergser, M, Kargl, R, Rosengarten, R D, Ayling, R A J, Nicholas, R J, Ellis   +9 more
openaire   +2 more sources

Population structure analysis and laboratory monitoring of Shigella by core-genome multilocus sequence typing

Nature Communications, 2022
Lab-based surveillance of Shigella has traditionally been based on serotyping but increasing availability of whole genome sequencing could enable higher resolution typing.
Iman Yassine, Sophie Lefèvre, Elisabeth E. Hansen, Corinne Ruckly, Isabelle Carle, Monique Lejay-Collin, Laëtitia Fabre, Rayane Rafei, Dominique Clermont, Maria Pardos de la Gandara, Fouad Dabboussi, Nicholas R. Thomson, François-Xavier Weill   +12 more
doaj   +1 more source

Retraction Note: A modified multilocus sequence typing protocol to genotype Kingella kingae from oropharyngeal swabs without bacterial isolation. [PDF]

BMC Microbiol
Houmami NE, Bzdrenga J, Pons JC, Minodier P, Durand GA, Oubraham A, Ceroni D, Yagupsky P, Raoult D, Bidet P, Fournier PE.   +10 more
europepmc   +3 more sources

Multilocus Sequence Typing of Mycobacterium xenopi [PDF]

Journal of Clinical Microbiology, 2014
ABSTRACT Mycobacterium xenopi is an opportunistic mycobacterial pathogen of increasing clinical importance. Surveillance of M. xenopi is hampered by the absence of tools for genotyping and molecular epidemiology.
David C, Alexander, Theodore K, Marras, Jennifer H, Ma, Samia, Mirza, Daniel, Liu, Julianne V, Kus, Hafid, Soualhine, Vincent, Escuyer, David, Warshauer, Sarah K, Brode, David J, Farrell, Frances B, Jamieson   +11 more
openaire   +2 more sources