High-throughput multilocus sequence typing: bringing molecular typing to the next level. [PDF]
PLoS ONE, 2012 Multilocus sequence typing (MLST) is a widely used system for typing microorganisms by sequence analysis of housekeeping genes. The main advantage of MLST in comparison to other typing techniques is the unambiguity and transferability of sequence data ...
Stefan A Boers +2 more
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Cronobacter, the emergent bacterial pathogen Enterobacter sakazakii comes of age; MLST and whole genome sequence analysis [PDF]
, 2014 Background: Following the association of Cronobacter spp. to several publicized fatal outbreaks in neonatal intensive care units of meningitis and necrotising enterocolitis, the World Health Organization (WHO) in 2004 requested the establishment of a ...
Dickins, B, Forsythe, SJ, Jolley, KA
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Limitations of Ribotyping as Genotyping Method for Corynebacterium ulcerans
Emerging Infectious Diseases, 2020 We conducted molecular typing of a Corynebacterium ulcerans isolate from a woman who died in Japan in 2016. Genomic DNA modification might have affected the isolate’s ribotyping profile.
Tsuyoshi Sekizuka +7 more
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Use of whole-genus genome sequence data to develop a multilocus sequence typing tool that accurately identifies Yersinia isolates to the species and subspecies levels [PDF]
, 2015 The genus Yersinia is a large and diverse bacterial genus consisting of human-pathogenic species, a fish-pathogenic species, and a large number of environmental species.
Carniel, Elisabeth +13 more
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Extended Sequence Typing of Campylobacter spp., United Kingdom
Emerging Infectious Diseases, 2008 Supplementing Campylobacter spp. multilocus sequence typing with nucleotide sequence typing of 3 antigen genes increased the discriminatory index achieved from 0.975 to 0.992 among 620 clinical isolates from Oxfordshire, United Kingdom.
Kate E. Dingle +4 more
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Multilocus sequence typing of a global collection of pasteurella multocida isolates from cattle and other host species demonstrates niche association [PDF]
, 2011 Background- Pasteurella multocida causes disease in many host species throughout the world. In bovids, it contributes to bovine respiratory disease (BRD) and causes haemorrhagic septicaemia (HS).
Hodgson, J.C. +3 more
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Brachyspira hyodysenteriae isolate multilocus sequence type dashboard [PDF]
Veterinary Record, 2021 This focus article has been prepared by Susanna Williamson, Emma Stubberfield and Anna Brzozowska of the APHA and Jill Thomson of SRUC – Veterinary Consulting Services, Edinburgh.
Susanna, Williamson +3 more
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Multilocus sequence typing of Cronobacter spp. from powdered infant formula and milk powder production factories [PDF]
, 2013 This study applied the Cronobacter spp. multilocus sequence typing (MLST) scheme to three strain collections, then known as Enterobacter sakazakii, which had been isolated between 1988 and 2009 from 14 countries. The results revealed the predominance (85%
Craven, HM +4 more
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Diverse sequence types of Klebsiella pneumoniae contribute to the dissemination of bla NDM-1 in India, Sweden, and the United Kingdom [PDF]
, 2012 Clinical isolates of Klebsiella pneumoniae producing NDM-1 carbapenemase from India (n = 22), the United Kingdom (n = 13), and Sweden (n = 4) were subjected to multilocus sequence typing (MLST), automated repetitive sequence-based PCR (rep-PCR ...
Froding, Inga +7 more
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Multilocus Sequence Typing of Clostridium difficile [PDF]
Journal of Clinical Microbiology, 2010 ABSTRACT A robust high-throughput multilocus sequence typing (MLST) scheme for Clostridium difficile was developed and validated using a diverse collection of 50 reference isolates representing 45 different PCR ribotypes and 102 isolates from recent clinical samples.
Griffiths, D +18 more
openaire +3 more sources