Results 131 to 140 of about 6,883,088 (299)

MULTIPLE SEQUENCE ALIGNMENT MENGGUNAKAN HIDDEN MARKOV MODEL [PDF]

, 2015
Mudah dan murahnya proses pengumpulan data biologi molekuler saat ini menyebabkan ukuran basis data genetika meningkat dengan pesat. Hal ini meningkatkan kebutuhan akan alat bantu komputasi untuk menganalisa data tersebut.
Afiahayati, Afiahayati, Mulyana, Sri
core   +2 more sources

Spatial heterogeneity of hotspot mutations and clonal relatedness in ovarian endometrioid carcinoma

Molecular Oncology, EarlyView.
Spatially resolved analysis revealed heterogeneous distributions of selected cancer‐associated mutations within ovarian endometrioid carcinomas. Shared mutations between paired endometrial and ovarian tumors supported clonal relatedness. These findings highlight the value of sampling multiple tumor regions when interpreting molecular profiles ...
Takahito Ashihara, Kosuke Murakami, Shiro Takamatsu, Akiko Kanto, Seiichi Mori, Tomoyuki Otani, Kazuko Sakai, Yasushi Kotani, Kazuto Nishio, Kaoru Abiko, Noriomi Matsumura   +10 more
wiley   +1 more source

An incremental three-pass system combination framework by combining multiple hypothesis alignment methods [PDF]

, 2010
System combination has been applied successfully to various machine translation tasks in recent years. As is known, the hypothesis alignment method is a critical factor for the translation quality of system combination.
Way, Andy, Du, Jinhua
core  

Directed evolution of enzymes at the crossroads of tradition and innovation

FEBS Open Bio, EarlyView.
An iterative cycle of data‐driven enzyme optimization comprising four stages: genetic diversification of a template enzyme, expression of protein variants, high‐throughput evaluation, and machine‐learning‐guided redesign of the next variant library.
Maria Tomkova, Andrej Mirossay, Erik Sedlak   +2 more
wiley   +1 more source

Molecular characterization of covRS mutations in M1UK Streptococcus pyogenes

FEBS Open Bio, EarlyView.
Group A Streptococcus (GAS) acquires covRS mutations driving a hypervirulent bacterial state, frequently associated with invasive disease‐like necrotizing fasciitis. We demonstrate that the newly emerged M1UK GAS lineage can also acquire these mutations.
Jarrad Pritchard, Emma‐Jayne Proctor, Jiawa Wang, Nikolas P. Johnston, Andrew Hayes, Georgia McCorkell, Haibo Yu, Jai Tree, Mark R. Davies, Mark J. Walker, Ronald Sluyter, Stephan Brouwer, Martina L. Sanderson‐Smith   +12 more
wiley   +1 more source

Global Network Alignment [PDF]

, 2010
Motivation: High-throughput methods for detecting molecular interactions have lead to a plethora of biological network data with much more yet to come, stimulating the development of techniques for biological network alignment.
Oleksii Kuchaiev, Natasa Przulj
core  

Transcripts enriched in codons that trigger P‐site tRNA‐mediated mRNA decay possess stable mRNA

FEBS Open Bio, EarlyView.
PTMD codons were first described by Mendel et al. as mediators of an mRNA decay pathway dependent on the human protein CNOT3, homologous to yeast Not5. Our findings confirm that PTMD codons destabilize transcripts; however, unlike in yeast, the human pathway specifically targets and slightly destabilizes primarily stable mRNAs.
Rodolfo Lopes Carneiro, Fernando Lucas Palhano   +1 more
wiley   +1 more source

Multiple sequence alignment.

, 2013
Multiple sequence alignment of the SEF amino acid sequence from Amblyomma maculatum, Rhipicephalus pulchellus, Culex quinquefasciatus, Drosophila melanogaster, and Homo sapiens.
Shahid Karim (191874), Khemraj Budachetri (489252), Rebecca E. Browning (489251), José M. C. Ribeiro (123592), Steven W. Adamson (489250)   +4 more
core   +1 more source

A comprehensive systematic literature review of multiple sequence alignment algorithms

Discover Computing
Multiple sequence alignment (MSA) is a fundamental technique in computational biology that compares protein, DNA, or RNA sequences to identify regions of similarity reflecting functional, structural, or evolutionary relationships.
Jeneffer Sabonsolin, Demelo Lao
doaj   +1 more source

Hyperosmotic stress‐induced redistribution of pre‐mRNA cleavage factor I subunits is associated with shifts in alternative polyadenylation

FEBS Open Bio, EarlyView.
Hyperosmotic stress triggers the relocation of the CFIm complex from the nucleus to the cytoplasm. This shift creates a nuclear ‘stoichiometric bottleneck’, limiting CFIm availability for mRNA processing. Consequently, specific mRNAs like NUDT21 and DICER1 undergo targeted 3′UTR shortening, demonstrating how spatial protein dynamics drive rapid ...
Hitomi Soumiya, Masatake Osawa, Hidefumi Fukumitsu   +2 more
wiley   +1 more source