Aquila: Efficient In-Kernel System Call Telemetry for Cloud-Native Environments [PDF]
SensorsSystem call telemetry is essential for understanding runtime behavior in cloud-native infrastructures, but existing eBPF-based monitors suffer from high per-event overhead, unreliable delivery under load, and limited context for correlating multi-step ...
Juyong Shin, Jisu Kim, Jaehyun Nam
doaj +2 more sources
Modularization in Belief-Desire-Intention agent programming and artifact-based environments [PDF]
PeerJ Computer Science, 2022 This article proposes an extension for the Agents and Artifacts meta-model to enable modularization. We adopt the Belief-Desire-Intention (BDI) model of agency to represent independent and reusable units of code by means of modules.
Gustavo Ortiz-Hernández +3 more
doaj +3 more sources
BioEMMA: Automated Generation of Model-Specific Escher-Compatible Maps from KEGG Pathways [PDF]
BiologyGenome-scale metabolic models are widely used to investigate cellular metabolism, but their interpretation and comparison are limited by the lack of reproducible pathway-level visualizations with a common spatial organization. This study presents BioEMMA,
Vladislav A. Kachnov +3 more
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Scientific modelling can be accessible, interoperable and user friendly: A case study for pasture and livestock modelling in Spain. [PDF]
PLoS ONE, 2023 This article describes the adaptation of a non-spatial model of pastureland dynamics, including vegetation life cycle, livestock management and nitrogen cycle, for use in a spatially explicit and modular modelling platform (k.LAB) dedicated to make data ...
Alba Marquez Torres +2 more
doaj +2 more sources
ViroBioTree: A Tree-Structured Biological Evidence Retrieval Framework for Viral Protein Function Annotation [PDF]
VirusesAccurate viral protein function annotation is essential for genomic surveillance, yet conventional retrieval-augmented generation (RAG) pipelines often fragment biological evidence into fixed-length text chunks, disrupting relationships among ORFs ...
Tinglian Lai +3 more
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JLIS.it, 2010 The possibilities of integration between ISBD and the semantic web have been examined through the work of the IFLA Study Groups, created with the task to investigate the possibilities for representing ISBD in web technologies and services.
Mirna Willer +2 more
doaj +9 more sources
The Phenotype List String Grammar for Enhanced Protein and Antigen Reporting in the Immunogenetic Context. [PDF]
HLAABSTRACT Standardised data representation is fundamental to the integrity, interoperability and reproducibility of immunogenetics and histocompatibility testing. While well‐established standards such as the genotype list (GL) String, histoimmunogenetics markup language (HML) and minimum information for reporting next‐generation sequence genotyping ...
Mack SJ +9 more
europepmc +2 more sources
Harnessing HPC resources for CMS jobs using a Virtual Private Network [PDF]
EPJ Web of Conferences, 2021 The processing needs for the High Luminosity (HL) upgrade for the LHC require the CMS collaboration to harness the computational power available on non-CMS resources, such as High-Performance Computing centers (HPCs). These sites often limit the external
Tovar Benjamin +4 more
doaj +1 more source
Building a Kubernetes infrastructure for CERN’s Content Management Systems [PDF]
EPJ Web of Conferences, 2021 The infrastructure behind home.cern and 1000 other Drupal websites serves more than 15,000 unique visitors daily. To best serve the site owners, a small engineering team needs development speed to adapt to their evolving needs and operational velocity to
Samaras-Tsakiris Konstantinos +4 more
doaj +1 more source
Large Semantic Graph Summarization Using Namespaces [PDF]
, 2022 We propose an approach to summarize large semantics graphs using namespaces. Semantic graphs based on the Resource Description Framework (RDF) use namespaces on their serializations.
da Costa, Ana Rita Santos Lopes +2 more
core +1 more source