Results 31 to 40 of about 775,236 (354)

Mechanical properties of Nucleic Acids and the non-local Twistable Wormlike Chain model [PDF]

open access: yesJ. Chem. Phys. 156, 234105 (2022), 2022
Mechanical properties of nucleic acids play an important role in many biological processes which often involve physical deformations of these molecules. At sufficiently long length scales (say above $\sim 20-30$ base pairs) the mechanics of DNA and RNA double helices is described by a homogeneous Twistable Wormlike Chain (TWLC), a semiflexible polymer ...
arxiv   +1 more source

A Suite of Therapeutically-Inspired Nucleic Acid Logic Systems for Conditional Generation of Single-Stranded and Double-Stranded Oligonucleotides

open access: yesNanomaterials, 2019
Several varieties of small nucleic acid constructs are able to modulate gene expression via one of a number of different pathways and mechanisms.
Paul Zakrevsky   +5 more
doaj   +1 more source

Pairwise alignment of the DNA sequence using hypercomplex number representation [PDF]

open access: yesBulletin of Mathematical Biology, Vol. 66, No. 5, pp. 1423-1438, 2004, 2014
A new set of DNA base-nucleic acid codes and their hypercomplex number representation have been introduced for taking the probability of each nucleotide into full account. A new scoring system has been proposed to suit the hypercomplex number representation of the DNA base-nucleic acid codes and incorporated with the method of dot matrix analysis and ...
arxiv   +1 more source

Next-generation fluorescent nucleic acids probes for microscopic analysis of intracellular nucleic acids

open access: yesApplied Microscopy, 2019
Fluorescence imaging of nucleic acids is a very important technique necessary to understand gene expression and the resulting changes in cell function. This mini-review focuses on sequence-specific fluorescence imaging of intracellular RNA and methylated
Akimitsu Okamoto
doaj   +1 more source

Simultaneous control of DNA and RNA processing efficiency using a nucleic acid calibration set. [PDF]

open access: yes, 2007
PCR-based detection techniques enables reliable and sensitive nucleic acid target detection. However, quantitative determination methods often fail to control for the efficiency of nucleic acid extraction, reverse transcription, and PCR amplification ...
Anna Rosa Garbuglia   +5 more
core   +1 more source

Improving the specificity of nucleic acid detection with endonuclease-actuated degradation

open access: yesCommunications Biology, 2022
A new method, SENTINEL, improves the specificity of nucleic acid target sequence identification via a combination of isothermal amplification and sequence-specific DNA endonucleases. The method can discriminate single base-pair differences and takes less
Roger S. Zou   +11 more
doaj   +1 more source

A Global Nucleic Acid Observatory for Biodefense and Planetary Health [PDF]

open access: yesarXiv, 2021
The spread of pandemic viruses and invasive species can be catastrophic for human societies and natural ecosystems. SARS-CoV-2 demonstrated that the speed of our response is critical, as each day of delay permitted exponential growth and dispersion of the virus.
arxiv  

Nucleic Acid Probes for Single-Molecule Localization Imaging of Cellular Biomolecules

open access: yesChemical & Biomedical Imaging, 2023
Endogenous biomolecules in cells are the basis of all life activities. Directly visualizing the structural characteristics and dynamic behaviors of cellular biomolecules is significant for understanding the molecular mechanisms in various biological ...
Junyuan Wei   +5 more
doaj   +1 more source

DNAssist, a C++ Program for Editing and Analysis of Nucleic Acid and Protein Sequences on PC-Compatible Computers Running Windows 95, 98, NT4.0 or 2000

open access: yesBioTechniques, 2000
The size of sequence databases, the rapid rate of generating sequence data and the need to routinely construct recombinant DNA molecules in molecular biological research necessitate the frequent handling and analysis of nucleotide and protein sequences ...
Hugh G. Patterton, Steven Graves
doaj   +1 more source

Mitigation of the effect of variability in digital PCR assays through use of duplexed reference assays for normalization

open access: yesBioTechniques, 2018
Digital PCR has been promoted as a technique for obtaining absolute measures of the amount of nucleic acid target sequence in a sample, but still lacks standardization in data reporting.
Sherry J Coulter
doaj   +1 more source

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