Results 11 to 20 of about 1,189,057 (413)

Ontology, Ontologies and the “I” of FAIR [PDF]

open access: yesData Intelligence, 2020
According to the FAIR guiding principles, one of the central attributes for maximizing the added value of information artifacts is interoperability.
G. Guizzardi
semanticscholar   +4 more sources

The Proteasix Ontology [PDF]

open access: yesJournal of Biomedical Semantics, 2016
The Proteasix Ontology (PxO) is an ontology that supports the Proteasix tool; an open-source peptide-centric tool that can be used to predict automatically and in a large-scale fashion in silico the proteases involved in the generation of proteolytic cleavage fragments (peptides)The PxO re-uses parts of the Protein Ontology, the three Gene Ontology sub-
Arguello Casteleiro, Mercedes   +2 more
openaire   +4 more sources

Bringing ontology to the Gene Ontology [PDF]

open access: yesComparative and Functional Genomics, 2003
AbstractWe present an analysis of some considerations involved in expressing the Gene Ontology (GO) as a machine‐processible ontology, reflecting principles of formal ontology. GO is a controlled vocabulary that is intended to facilitate communication between biologists by standardizing usage of terms in database annotations.
Jennifer Williams, William Andersen
openaire   +3 more sources

A guideline for reporting experimental protocols in life sciences [PDF]

open access: yesPeerJ, 2018
Experimental protocols are key when planning, performing and publishing research in many disciplines, especially in relation to the reporting of materials and methods. However, they vary in their content, structure and associated data elements.
Olga Giraldo   +2 more
doaj   +2 more sources

Ontology Reuse: the Real Test of Ontological Design [PDF]

open access: yesFrontiers in Artificial Intelligence and Applications 355 (2022) 631-645, 2022
Reusing ontologies in practice is still very challenging, especially when multiple ontologies are (jointly) involved. Moreover, despite recent advances, the realization of systematic ontology quality assurance remains a difficult problem. In this work, the quality of thirty biomedical ontologies, and the Computer Science Ontology are investigated, from
arxiv   +1 more source

The Gene Ontology resource: enriching a GOld mine

open access: yesNucleic Acids Res., 2020
The Gene Ontology Consortium (GOC) provides the most comprehensive resource currently available for computable knowledge regarding the functions of genes and gene products. Here, we report the advances of the consortium over the past two years.
S. Carbon   +179 more
semanticscholar   +1 more source

The Computational and Pragmatic Approach to the Dynamics of Science [PDF]

open access: yesFilozofia i Nauka, 2020
Science means here mathematics and those empirical disciplines which avail themselves of mathematical models. The pragmatic approach is conceived in Karl R. Popper’s The Logic of Scientific Discovery (p.
Witold Marciszewski
doaj   +1 more source

Ontology for immunogenetics: the IMGT-ONTOLOGY [PDF]

open access: yesBioinformatics, 1999
Abstract Motivation: IMGT, the international ImMunoGene- Tics database (http://imgt.cines.fr:8104), created by M.-P. Lefranc, is an integrated database specializing in antigen receptors (immunoglobulins and T-cell receptors) and major histocompatibility complex (MHC) of all vertebrate species.
Giudicelli, Véronique   +1 more
openaire   +3 more sources

Ontologies and ontological methods in linguistics [PDF]

open access: yesLanguage and Linguistics Compass, 2019
AbstractIn the last decade, linguists have started to develop and make use of ontologies, encouraged by the progress made in areas such as Artificial Intelligence and the Semantic Web. This paper gives an overview of notions and dimensions of “ontology” and of ontologies for and in linguistics.
Andrea C. Schalley, Andrea C. Schalley
openaire   +4 more sources

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