Results 11 to 20 of about 135,056 (273)
A transcription unit based systems biology study on Salmonella typhimurium gene organization, evolution, co-expression, and regulation [PDF]
Frontiers in MicrobiologyA bacterial transcription unit (TU) could be composed of a single gene or multiple adjacent genes forming an operon. Traditional systems biology often relies on gene-centric analysis, overlooking the regulatory complexity inherent in the operon structure,
Leting Sun +9 more
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Operon Prediction Model Based on Markov Clustering Algorithm [PDF]
International Journal Bioautomation, 2019 There are many operon prediction models, but few methods can be applied to the operon prediction of new sequencing species effectively. In this paper, an operon prediction model based on Markov clustering algorithm is proposed.
Zhenmei Zhang, Yongquan Liang
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The life-cycle of operons. [PDF]
PLoS Genetics, 2006 Operons are a major feature of all prokaryotic genomes, but how and why operon structures vary is not well understood. To elucidate the life-cycle of operons, we compared gene order between Escherichia coli K12 and its relatives and identified the ...
Morgan N Price, Adam P Arkin, Eric J Alm
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Identification of the Integration/Excision Module and Regulatory Elements Involved in the Mobility of IME8, an Integrative and Mobilizable Element From Mosquitocidal Lysinibacillus sphaericus [PDF]
Microbial BiotechnologyLysinibacillus sphaericus, a bacterium successfully used in the control of mosquitoes, bears its insecticidal traits in GI8, a recently identified mosquitocidal genomic island.
Yifeng Hu +5 more
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eLife, 2021 Prokaryotes utilize polycistronic messages (operons) to co-translate proteins involved in the same biological processes. Whether eukaryotes achieve similar regulation by selectively assembling and translating monocistronic messages derived from different
Rohini R Nair +7 more
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Reporter Gene-Based qRT-PCR Assay for Rho-Dependent Termination In Vivo
Cells, 2023 In bacteria, the Rho protein mediates Rho-dependent termination (RDT) by identifying a non-specific cytosine-rich Rho utilization site on the newly synthesized RNA. As a result of RDT, downstream RNA transcription is reduced.
Monford Paul Abishek N +3 more
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Stoichiometry of the Gene Products From the Tetrachloroethene Reductive Dehalogenase Operon pceABCT
Frontiers in Microbiology, 2022 Organohalide respiration (OHR) is a bacterial anaerobic process that uses halogenated compounds, e.g., tetrachloroethene (PCE), as terminal electron acceptors.
Lorenzo Cimmino +3 more
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Diel gene expression improves software prediction of cyanobacterial operons [PDF]
PeerJ, 2022 Cyanobacteria are important participants in global biogeochemical process, but their metabolic processes and genomic functions are incompletely understood.
Philip Heller
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Cellular and Molecular Life Sciences, 2009 Operons (clusters of co-regulated genes with related functions) are common features of bacterial genomes. More recently, functional gene clustering has been reported in eukaryotes, from yeasts to filamentous fungi, plants, and animals. Gene clusters can consist of paralogous genes that have most likely arisen by gene duplication. However, there are now
Osbourn, Anne E., Field, Ben
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Frontiers in Bioengineering and Biotechnology, 2021 The biosynthetic genes for secondary metabolites are often clustered into giant operons with no transcription terminator before the end. The long transcripts are frangible and the transcription efficiency declines along with the process.
Ye Wang +5 more
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