Results 1 to 10 of about 42,189 (273)
High precision detection of conserved segments from synteny blocks. [PDF]
PLoS ONE, 2017 A conserved segment, i.e. a segment of chromosome unbroken during evolution, is an important operational concept in comparative genomics. Until now, algorithms that are designed to identify conserved segments often return synteny blocks that overlap ...
Joseph Mex Lucas, Hugues Roest Crollius
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Improved Genome Assembly and Annotation of the Soybean Aphid (Aphis glycines Matsumura)
G3: Genes, Genomes, Genetics, 2020 Aphids are an economically important insect group due to their role as plant disease vectors. Despite this economic impact, genomic resources have only been generated for a small number of aphid species.
Thomas C. Mathers
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BMC Genomics, 2019 Background B-box (BBX) proteins play important roles in plant growth regulation and development including photomorphogenesis, photoperiodic regulation of flowering, and responses to biotic and abiotic stresses.
Abdullah Shalmani +9 more
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Using the Generic Synteny Browser (GBrowse_syn) [PDF]
Current Protocols in Bioinformatics, 2010 AbstractGenome Browsers are software that allow the user to view genome annotations in the context of a reference sequence, such as a chromosome, contig, scaffold, etc. The Generic Genome Browser (GBrowse) is an open‐source genome browser package developed as part of the Generic Model Database Project (see UNIT here; Stein et al., 2002). The increasing
Sheldon J, McKay +2 more
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Potential of the Burkholderia cepacia Complex to Produce 4-Hydroxy-3-Methyl-2-Alkyquinolines
Frontiers in Cellular and Infection Microbiology, 2019 A few Burkholderia species, especially Burkholderia pseudomallei, Burkholderia thailandensis, Burkholderia ambifaria, and Burkholderia cepacia, are known to produce and release various 4-hydroxy-3-methyl-2-alkylquinolines (HMAQs), a family of molecules ...
Pauline M. L. Coulon +2 more
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Frontiers in Plant Science, 2022 The genus Broussonetia (Moraceae) is comprised of three non-hybrid recognized species that all produce high quality fiber essential in the development of papermaking and barkcloth-making technology. In addition, these species also have medicinal value in
Chanjuan Lai +12 more
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Plants, 2022 The common bean (Phaseolus vulgaris L.) is the most important legume crop directly used for human consumption worldwide. Bean rust, caused by Uromyces appendiculatus, is a devastating disease and usually causes severe loss of seed yield and pod quality ...
Xinyi Wu +10 more
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The Unified Grass Genome: Synergy in Synteny [PDF]
Genome Research, 1997 The grasses, members of the family Gramineae or Poaceae, are represented by over 10,000 species (Kellogg and Birchler 1993). Three of the domesticated grasses, rice, wheat, and maize, account for about half of total world food production. Although the oldest known grass fossils have been found in paleocene-eocene deposits that are ∼50–60 million years ...
J L, Bennetzen, M, Freeling
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Chromosomal mapping, differential origin and evolution of the
Genetics Selection Evolution, 2008 S100 proteins are calcium-binding proteins, which exist only in vertebrates and which constitute a large protein family. The origin and evolution of the S100 family in vertebrate lineages remain a challenge.
Zhou Rongjia, Cheng Hanhua, Shang Xuan
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Gene Gangs of the Chloroviruses: Conserved Clusters of Collinear Monocistronic Genes
Viruses, 2018 Chloroviruses (family Phycodnaviridae) are dsDNA viruses found throughout the world’s inland waters. The open reading frames in the genomes of 41 sequenced chloroviruses (330 ± 40 kbp each) representing three virus types were analyzed for evidence of ...
Phillip Seitzer +5 more
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