Results 31 to 40 of about 42,189 (273)

SynChro: a fast and easy tool to reconstruct and visualize synteny blocks along eukaryotic chromosomes. [PDF]

PLoS ONE, 2014
Reconstructing synteny blocks is an essential step in comparative genomics studies. Different methods were already developed to answer various needs such as genome (re-)annotation, identification of duplicated regions and whole genome duplication events ...
Guénola Drillon, Alessandra Carbone, Gilles Fischer   +2 more
doaj   +1 more source

The Late Blight Resistance Locus Rpi-blb3 from Solanum bulbocastanum Belongs to a Major Late Blight R Gene Cluster on Chromosome 4 of Potato

Molecular Plant-Microbe Interactions, 2005
Late blight, caused by Phytophthora infestans, is one of the most devastating diseases in cultivated potato. Breeding of new potato cultivars with high levels of resistance to P.
Tae-Ho Park, Jack Gros, Anne Sikkema, Vivianne G. A. A. Vleeshouwers, Marielle Muskens, Sjefke Allefs, Evert Jacobsen, Richard G. F. Visser, Edwin A. G. van der Vossen   +8 more
doaj   +1 more source

Physical Mapping of the Anopheles (Nyssorhynchus) darlingi Genomic Scaffolds

Insects, 2021
The genome assembly of Anopheles darlingi consists of 2221 scaffolds (N50 = 115,072 bp) and has a size spanning 136.94 Mbp. This assembly represents one of the smallest genomes among Anopheles species.
Míriam Silva Rafael, Leticia Cegatti Bridi, Igor V. Sharakhov, Osvaldo Marinotti, Maria V. Sharakhova, Vladimir Timoshevskiy, Giselle Moura Guimarães-Marques, Valéria Silva Santos, Carlos Gustavo Nunes da Silva, Spartaco Astolfi-Filho, Wanderli Pedro Tadei   +10 more
doaj   +1 more source

Transposable Element Genomic Fissuring in Pyrenophora teres Is Associated With Genome Expansion and Dynamics of Host–Pathogen Genetic Interactions

Frontiers in Genetics, 2018
Pyrenophora teres, P. teres f. teres (PTT) and P. teres f. maculata (PTM) cause significant diseases in barley, but little is known about the large-scale genomic differences that may distinguish the two forms.
Robert A. Syme, Anke Martin, Nathan A. Wyatt, Julie A. Lawrence, Mariano J. Muria-Gonzalez, Timothy L. Friesen, Timothy L. Friesen, Simon R. Ellwood   +7 more
doaj   +1 more source

A High-Density Linkage Map of the Forage Grass Eragrostis curvula and Localization of the Diplospory Locus

Frontiers in Plant Science, 2019
Eragrostis curvula (Schrad.) Nees (weeping lovegrass) is an apomictic species native to Southern Africa that is used as forage grass in semiarid regions of Argentina.
Diego Zappacosta, Jimena Gallardo, José Carballo, Mauro Meier, Juan Manuel Rodrigo, Cristian A. Gallo, Juan Pablo Selva, Juliana Stein, Juan Pablo A. Ortiz, Emidio Albertini, Viviana Echenique   +10 more
doaj   +1 more source

Reconstructing the genomic architecture of mammalian ancestors using multispecies comparative maps

Human Genomics, 2003
Rapidly developing comparative gene maps in selected mammal species are providing an opportunity to reconstruct the genomic architecture of mammalian ancestors and study rearrangements that transformed this ancestral genome into existing mammalian ...
Murphy William J, Bourque Guillaume, Tesler Glenn, Pevzner Pavel, O'Brien Stephen J   +4 more
doaj   +1 more source

StAR-Related Lipid Transfer (START) Domains Across the Rice Pangenome Reveal How Ontogeny Recapitulated Selection Pressures During Rice Domestication

Frontiers in Genetics, 2021
The StAR-related lipid transfer (START) domain containing proteins or START proteins, encoded by a plant amplified family of evolutionary conserved genes, play important roles in lipid binding, transport, signaling, and modulation of transcriptional ...
Sanjeet Kumar Mahtha, Ravi Kiran Purama, Gitanjali Yadav, Gitanjali Yadav   +3 more
doaj   +1 more source

TNFRSF4 Synteny Analysis

, 2023
Fig. 10, Synteny analysis of the TNFRSF4 genes found in domestic cat, lion, leopard, and lynx. Genomic location of these genes were found on Ensembl, and synteny analysis showed each gene being surrounded by the same two genes, TNFRSF18 and SDF4.
Matthew Nguyen (14780485)
core   +1 more source

A High-Density Genetic Map Enables Genome Synteny and QTL Mapping of Vegetative Growth and Leaf Traits in Gardenia

Frontiers in Genetics, 2022
The gardenia is a traditional medicinal horticultural plant in China, but its molecular genetic research has been largely hysteretic. Here, we constructed an F1 population with 200 true hybrid individuals.
Yang Cui, Baolian Fan, Xu Xu, Shasha Sheng, Yuhui Xu, Xiaoyun Wang   +5 more
doaj   +1 more source

Functional alleles of the flowering time regulator FRIGIDA in the Brassica oleracea genome

BMC Plant Biology, 2012
Background Plants adopt different reproductive strategies as an adaptation to growth in a range of climates. In Arabidopsis thaliana FRIGIDA (FRI) confers a vernalization requirement and thus winter annual habit by increasing the expression of the MADS ...
Irwin Judith A, Lister Clare, Soumpourou Eleni, Zhang Yanwen, Howell Elaine C, Teakle Graham, Dean Caroline   +6 more
doaj   +1 more source