Results 31 to 40 of about 46,398 (238)

Dynamic Expression of Long Non-Coding RNAs Throughout Parasite Sexual and Neural Maturation in Schistosoma Japonicum

Non-Coding RNA, 2020
Schistosoma japonicum is a flatworm that causes schistosomiasis, a neglected tropical disease. S. japonicum RNA-Seq analyses has been previously reported in the literature on females and males obtained during sexual maturation from 14 to 28 days post ...
Lucas F. Maciel, David A. Morales-Vicente, Sergio Verjovski-Almeida   +2 more
doaj   +1 more source

GRIMM-Synteny and ST-Synteny on the Same Simulated Data

, 2013
The genomic dot-plot is shown in thick green. The synteny blocks identified by GRIMM-Synteny are shown as blue rectangles, and the ones from ST-Synteny are dashed red rectangles. When block coordinates coincide, this appears as dashed blue/red.
Pavel A Pevzner (16055), Glenn Tesler (274804), Qian Peng (74762)   +2 more
core   +1 more source

Genome-wide identification reveals unprecedented expansion and stress-responsive expression patterns of the lipoxygenase gene family in soybean (Glycine max L.)

Frontiers in Plant Science
BackgroundLipoxygenases (LOXs) catalyze polyunsaturated fatty acid oxygenation and regulate plant stress responses and oxylipin biosynthesis. This study provides comprehensive genome-wide characterization of the soybean LOX gene family, revealing ...
Sobhi F. Lamlom, Sobhi F. Lamlom, Sobhi F. Lamlom, Sobhi F. Lamlom, Sobhi F. Lamlom, Sobhi F. Lamlom, Taifeng Zhang, Taifeng Zhang, Taifeng Zhang, Taifeng Zhang, Yanbo Wang, Honglei Ren, Fuqiang Song, Guojun Feng, Guojun Feng   +14 more
doaj   +1 more source

Large synteny blocks revealed between Caenorhabditis elegans and Caenorhabditis briggsae genomes using OrthoCluster

BMC Genomics, 2010
Background Accurate identification of synteny blocks is an important step in comparative genomics towards the understanding of genome architecture and expression.
Chen Nansheng, Vergara Ismael A
doaj   +1 more source

Synteny illustration.

, 2019
Visualization of the assigned synteny types: “some synteny” (), paralogues of genes found close to one duplicate are also found close to the other duplicate; “no synteny” (), less than two paralogues for other genes are found close to both paralogue ...
Víctor García-Carpintero (6832334), Victor Gallego (6832331), Luz Pérez (6832340), Christoffer Rozenfeld (6832328), Jose Blanca (3515138), Joaquín Cañizares (123501), Juan F. Asturiano (6832343), David S. Peñaranda (294490), Juan Germán Herranz-Jusdado (6832337)   +8 more
core   +1 more source

A novel mode of chromosomal evolution peculiar to filamentous Ascomycete fungi [PDF]

, 2011
Gene loss, inversions, translocations, and other chromosomal rearrangements vary among species, resulting in different rates of structural genome evolution.
Hane, J., Gert HJ Kema, Hane, J.K., Barbara J Howlett, Howlett, B.J., Oliver, Richard P, Kema, Ghj, G., Rouxel, T., Howlett, BJ, Hane, J.K., J., James K Hane, Rouxel, T, Kema, G.H.J., Oliver, R.P., Hane, James K, Goodwin, Stephen B, Rouxel, Thierry, T., Goodwin, S.B., S., Goodwin, SB, Oliver, Richard, Thierry Rouxel, Howlett, Barbara J, Stephen B Goodwin, Richard P Oliver, Kema, Gert HJ, Kema, GHJ, Hane, JK, Howlett, B.J., B., Kema, G., Goodwin, S., Goodwin, S.B., Rouxel, Thierry, Howlett, B., Oliver, RP, Oliver, R.P., R.   +34 more
core   +1 more source

Augmenting bacterial similarity measures using a graph-based genome representation

mSystems
Relationships between bacterial taxa are traditionally defined using 16S rRNA nucleotide similarity or average nucleotide identity. Improvements in sequencing technology provide additional pairwise information on genome sequences, which may provide ...
Vivek Ramanan, Indra Neil Sarkar
doaj   +1 more source

Original synteny

, 1996
. The inference of genome rearrangement requires detailed gene maps of related species. For most multichromosomal species, how-ever, knowledge of chromosomal ssignment of genes outstrips mapping data.
David Sankoff, Vincent Ferretti, Joseph H. Nadeau   +2 more
core   +1 more source

RNAi in the Rhizarian Phytopathogen Plasmodiophora brassicae: The Causal Agent of Clubroot Disease in Cruciferous Crops

Advanced Science, EarlyView.
This study uncovers an unusual RNAi pathway in the rhizarian pathogen Plasmodiophora brassicae. In the absence of Dicer, a Drosha‐like RNase III protein supports the biogenesis of predominant 21‐nt small RNAs, and two Argonaute proteins mediate small RNA‐guided silencing.
Xiong Zhang, Yupo Wu, Jiachang Hou, Lixia Gao, Longqi Pan, Cuicui Shen, Chuanji Zhao, Feng Gao, Yi Zhang, Li Ren, Xiaoping Fang, Xiaoling Dun, Shengyi Liu, Lijiang Liu   +13 more
wiley   +1 more source

Improved Genome Assembly and Annotation of the Soybean Aphid (Aphis glycines Matsumura)

G3: Genes, Genomes, Genetics, 2020
Aphids are an economically important insect group due to their role as plant disease vectors. Despite this economic impact, genomic resources have only been generated for a small number of aphid species.
Thomas C. Mathers
doaj   +1 more source