Results 51 to 60 of about 46,398 (238)

Comparative analysis of mitochondrial genomes of Broussonetia spp. (Moraceae) reveals heterogeneity in structure, synteny, intercellular gene transfer, and RNA editing

Frontiers in Plant Science, 2022
The genus Broussonetia (Moraceae) is comprised of three non-hybrid recognized species that all produce high quality fiber essential in the development of papermaking and barkcloth-making technology. In addition, these species also have medicinal value in
Chanjuan Lai, Jie Wang, Jie Wang, Jie Wang, Shenglong Kan, Shenglong Kan, Shuo Zhang, Shuo Zhang, Pan Li, Wayne Gerald Reeve, Zhiqiang Wu, Zhiqiang Wu, Yonghua Zhang   +12 more
doaj   +1 more source

Synteny analysis of PK genes.

, 2018
(A) Synteny between G. raimondii (A1-A13) and G. arboretum (D1-D13). (B) Synteny between G. barbadense (At1-At13) and G. hirsutum (At1-At13). (C) Synteny between G. barbadense (Dt1-Dt13) and G. hirsutum (Dt1-Dt13). (D) Synteny between G.
Xuecheng Cao (501147), Yang Li (7082), Xingqi Guo (429889), Guilin Li (133041), Jun Yan (28467)   +4 more
core   +1 more source

Sorghum T2T pangenome highlights comprehensive genomic variation

iMetaOmics, EarlyView.
Three newly assembled telomere‐to‐telomere (T2T) genomes representing wild, landrace, and transformable germplasm were integrated with seven publicly available T2T genomes to construct a graph‐based pangenome. Comparative analyses revealed extensive centromere divergence, including distinct CEN137 monomer and CEN274 dimer organization, and showed that ...
Lihua Wang, Chuanzheng Wei, Hope O. Okunbor, Xiaofei Deng, Die Hu, Yongfei Wang, Junli Du, Ephrem Habyarimana, Yongfu Tao, Yi‐Hong Wang, Jieqin Li   +10 more
wiley   +1 more source

Gene Gangs of the Chloroviruses: Conserved Clusters of Collinear Monocistronic Genes

Viruses, 2018
Chloroviruses (family Phycodnaviridae) are dsDNA viruses found throughout the world’s inland waters. The open reading frames in the genomes of 41 sequenced chloroviruses (330 ± 40 kbp each) representing three virus types were analyzed for evidence of ...
Phillip Seitzer, Adrien Jeanniard, Fangrui Ma, James L. Van Etten, Marc T. Facciotti, David D. Dunigan   +5 more
doaj   +1 more source

Unravelling the Genetic Architecture of Rust Resistance in the Common Bean (Phaseolus vulgaris L.) by Combining QTL-Seq and GWAS Analysis

Plants, 2022
The common bean (Phaseolus vulgaris L.) is the most important legume crop directly used for human consumption worldwide. Bean rust, caused by Uromyces appendiculatus, is a devastating disease and usually causes severe loss of seed yield and pod quality ...
Xinyi Wu, Baogen Wang, Yan Xin, Ying Wang, Shuo Tian, Jian Wang, Xiaohua Wu, Zhongfu Lu, Xinjiang Qi, Liming Xu, Guojing Li   +10 more
doaj   +1 more source

Synteny between the genome assemblies of four Eutypa lata isolates represented as circos plots.

, 2022
Synteny blocks are coloured based on the reference sequence and query assembly is represented in grey. Query contigs have been ordered based on synteny length to reference. Contig IDs are labelled A) Genome synteny between E.
Steven Van Den Heuvel (12334406), Mark R. Sosnowski (12334403), Cristobal A. Onetto (5258162), Anthony R. Borneman (12334409)   +3 more
core   +1 more source

Deciphering transcriptome complexity via long‐read sequencing

iMeta, EarlyView.
Long‐read sequencing is transforming transcriptomics from gene‐level quantification to isoform‐resolved interpretation by directly resolving full‐length transcript structures, transcription in repetitive regions, and linked molecular features. This review provides an end‐to‐end roadmap covering sequencing platforms, library preparation strategies ...
Chuwen Xu, Jia Li, Chenxi Yin, Keying Li, Tian Wang, Shiwen Gao, Yue Yu, Cheng Chang, Ye Wang, Guoqing Tong, Liang Gong, Wen Hu, Guoliang Chai, Yilai Han, Qian Qin, Suoqin Jin, Xiufen Zou, Bo Li, Tianyuan Zhang, Ana Conesa, Yunhao Wang, Dingjie Wang   +21 more
wiley   +1 more source

Synteny analysis of mitochondrial genomes.

, 2013
Synteny comparison of genomes between Ganoderma lucidum and Trametes cingulata (A), Schizophyllum commune (B), Cryptococcus neoformans (C), and Ustilago maydis (D). The genes are represented with lines, and their names are shown next to the corresponding
Jianqin Li (450304), Jin Lan (450306), Jianhui Zhang (450305), Chang Liu (35901), Haimei Chen (392203), Xiangdong Chen (149352)   +5 more
core   +1 more source

Infection mechanisms of Rhizoctonia cerealis in wheat

iMeta, EarlyView.
We discover that R. cerealis (Rc) is a primary pathogen causing sharp eyespot of wheat after 335 distinct isolates were isolated from 1683 SE‐diseased wheat plants across China over 7 years using a single hyphal tip isolation method. We then generated high‐quality reference genomes via de novo sequencing of five representative Rc isolates and ...
Yan Ren, Ti Liu, Heying Zhao, Qirun Qian, Lufei Cui, Zhipeng Sun, Wenkai Yang, Peng Guo, Sisheng Wang, Lingran Zhang, Congwei Sun, Aolin Jia, Ning Zhang, Feng Chen   +13 more
wiley   +1 more source

Domesticated bacterial origin genes regulate homeostasis of the insect gut microbiome and empower adaptation

iMeta, EarlyView.
Horizontal gene transfer introduced bacterial CDC genes into the leafhopper genome, providing genetic material for subsequent evolutionary innovation. Different CDC copies diversified at the sequence, structural, and functional levels. RdCDC3 retained its ancestral pore‐forming activity and was recruited for egg defense, whereas RdCDC9 lost its ...
Zhenjia Zhang, Yubo Zhang, Kun Zhao, Guangyuan Cheng, Zhihao Lu, Dongju Wang, Yiqun Liu, Jianguo Wu, Liying Wang, Lisheng Zhang, Xinhai Ye, Li Yu, Wei Zhang, Yi Li   +13 more
wiley   +1 more source