Results 71 to 80 of about 42,189 (273)

Mitochondrial genome synteny maps.

open access: yes, 2016
A. Synteny comparisons between C. cubensis, C. deuterocubensis and C. austroafricana. B. Synteny comparison between C. cubensis and C. austroafricana. C. Comparisons between C. cubensis, C. parasitica and C. deuterocubensis. D.
Brenda Diana Wingfield (2819746)   +4 more
core   +1 more source

Relationship between synteny and phylogenetic distance across different insect orders.

open access: yes, 2021
Lines show the best-fitting exponential decay model. Note the log-transformed y-axis. Phylogenetic distance is calculated from a total tree height of 1. Higher values of the GOC score indicate more synteny, lower values less synteny.
Analyn Anzano Cabras (11356048)   +8 more
core   +1 more source

Transcriptomic stress responses in Vaccinium spp. F1 hybrids: Implications for temperature‐resilient cranberry breeding using a crop wild relative

open access: yesPLANTS, PEOPLE, PLANET, EarlyView.
Climate extremes threaten the sustainability of cranberry production, a culturally and economically important North American crop. This study demonstrates that wild cranberries (Vaccinium oxycoccos) harbor genetic variation that may enhance cold stress resilience when introduced into cultivated cranberry through hybridization.
Audrey Dickinson   +5 more
wiley   +1 more source

Synteny analysis of mitochondrial genomes.

open access: yes, 2013
Synteny comparison of genomes between Ganoderma lucidum and Trametes cingulata (A), Schizophyllum commune (B), Cryptococcus neoformans (C), and Ustilago maydis (D). The genes are represented with lines, and their names are shown next to the corresponding
Jianqin Li (450304)   +5 more
core   +1 more source

First genome sequence of a European Alternaria brassicae isolate and genes involved in early development of alternaria leaf spot on Brassica juncea

open access: yesPest Management Science, EarlyView.
This article reports the first genome sequence of a UK Alternaria brassicae isolate. Dual RNA‐sequencing profiling of A. brassicae‐infected Brassica juncea leaves identified differentially expressed genes involved in pathogenicity and host response pathways in moderately resistant Sej‐2 (2) and moderately susceptible Pusa Jaikisan cultivars.
Kevin M. King   +6 more
wiley   +1 more source

Comparative Analysis of Stress Adaptation in the Yeast Microbiome of Cactus

open access: yesYeast, EarlyView.
Yeasts and related fungi isolated from cacti or nearby non‐cactus plants were characterized phenotypically and genomically, revealing differences that hint at modes of adaptation to the cactus host. ABSTRACT Together with other fungi, yeasts make up a significant component of the plant microbiome. As the planet warms, cacti expand their range.
Alya N. Hussain   +2 more
wiley   +1 more source

SMORE: Synteny Modulator of Repetitive Elements [PDF]

open access: yesLife, 2017
Several families of multicopy genes, such as transfer ribonucleic acids (tRNAs) and ribosomal RNAs (rRNAs), are subject to concerted evolution, an effect that keeps sequences of paralogous genes effectively identical. Under these circumstances, it is impossible to distinguish orthologs from paralogs on the basis of sequence similarity alone.
Sarah Berkemer   +3 more
openaire   +3 more sources

Full‐length transcriptome profiling of true bug mitochondrial genomes reveals the unique transcriptional regulation during insect evolution

open access: yesInsect Science, EarlyView.
The mitogenome was transcribed into complete primary polycistrons on both strands. The heteropteran mitochondrial transcription termination factor (HmTTF) functions as a bidirectional attenuator rather than a terminator, and co‐evolution of HmTTF and the binding sites was observed.
Shiwen Xu   +6 more
wiley   +1 more source

Hox Gene Variation Drives Morphological Specialization of Humpback Grouper Cromileptes altivelis

open access: yesIntegrative Zoology, EarlyView.
Cromileptes altivelis exhibits a distinctive “sunken head and humpback” morphology, formed through cranial remodeling. Genetic analyses identified unique amino acid variants in Hoxa7a and Hoxa10b, with functional tests confirming their role in enhancing osteoblast activity and driving cranial remodeling.
Xiaoying Cao   +4 more
wiley   +1 more source

CottonGen Synteny Viewer

open access: yes, 2019
Conserved syntenic regions among publicly available cotton genomes were analyzed by CottonGen and made available using the Tripal Synteny Viewer developed by the Fei Bioinformatics Lab from the Boyce Thomson Institute at Cornell University.
Taein Lee (17478699)   +7 more
core   +1 more source

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