Results 141 to 150 of about 15,819 (203)

Salminus brasiliensis minimal reference pangenome graph, with four full chromosome-level haplotypes (two individuals: ARG-BRA), including unplaced scaffolds

Raissa Graciano
openalex   +2 more sources

De Bruijn graphs for pangenomics: in-depth performance benchmarking of de Bruijn graph-based tools for read mapping. [PDF]

Brief Bioinform
Bingöl Z, Şahin B, Zambaku K, Roman-Brenes R, Koliogeorgi K, Firtina C, Mutlu O, Alkan C.   +7 more
europepmc   +1 more source

Figure 5 from Improving Long-Read Somatic Structural Variant Calling with Pangenome and De Novo Personal Genome Assembly

Qian Qin, Jakob Heinz, Heng Li
openalex   +1 more source

Discovery of <i>Staphylococcus aureus</i> small RNAs highly expressed during human chronic infection. [PDF]

mBio
Briaud P, Schumacher J, Whiteley M.
europepmc   +1 more source

Figure 2 from Improving Long-Read Somatic Structural Variant Calling with Pangenome and De Novo Personal Genome Assembly

Qian Qin, Jakob Heinz, Heng Li
openalex   +1 more source

Pangenome and Pan-Transcriptome Analysis of the <i>WOX</i> Gene Family Reveals Evolutionary Conservation and Diversification in Alfalfa. [PDF]

Ecol Evol
Wen H, Bai Y, Guo Z, Qian W, Huang Y, Liang Y, Yang G, Zhang Y.   +7 more
europepmc   +1 more source

All sequence paths from the Salminus brasiliensis minimal reference pangenome graph (full version, including unplaced scaffolds).

Raissa Graciano
openalex   +2 more sources

Theseus: fast and optimal affine-gap sequence-to-graph alignment. [PDF]

Bioinformatics
Jiménez-Blanco A, López-Villellas L, Moure JC, Moreto M, Marco-Sola S.   +4 more
europepmc   +1 more source

Supplementary Table 1 from Improving Long-Read Somatic Structural Variant Calling with Pangenome and De Novo Personal Genome Assembly

Qian Qin, Jakob Heinz, Heng Li
openalex   +1 more source

Integrated genomic analysis of <i>Stenotrophomonas maltophilia</i>: resistome, virulence-associated genes, predicted mobile genetic elements, and core-genome phylogeny. [PDF]

Front Microbiol
Sun R, Liu Y, Cao X, Liu C, Gao S, Zhou B, Sun Q.   +6 more
europepmc   +1 more source