Results 131 to 140 of about 15,819 (203)

Figure 4 from Improving Long-Read Somatic Structural Variant Calling with Pangenome and De Novo Personal Genome Assembly

Qian Qin, Jakob Heinz, Heng Li
openalex   +1 more source

Characterizing the pangenome-based virulome and resistome of uropathogenic <i>Escherichia coli</i> from Ecuador. [PDF]

Virulence
Mejía-Limones I, Avellán-Llaguno RD, Morey-León G G, Andrade-Molina D.   +3 more
europepmc   +1 more source

Pan1c (Pangenome at chromosome level)

Pan1c : a snakemake workflow for creating pangenomes at chromosome scale. Pan1c is a Snakemake workflow that simplifies pangenome creation by focusing on similar chromosome comparisons, using either PGGB or Minigraph-Cactus.
Klopp, Christophe, Gaspin, Christine, Mergez, Alexis, Legeai, Fabrice, Racoupeau, Martin, Choulet, Frédéric   +5 more
core   +1 more source

Supplementary Table 3 from Improving Long-Read Somatic Structural Variant Calling with Pangenome and De Novo Personal Genome Assembly

Qian Qin, Jakob Heinz, Heng Li
openalex   +1 more source

Panorama: A robust pangenome-based method for predicting and comparing biological systems across species. [PDF]

PLoS Comput Biol
Arnoux J, Mainguy J, Bry L, Fernandez de Grado Q, Hoblos Y, Vallenet D, Calteau A.   +6 more
europepmc   +1 more source

Supplementary Figure 1 from Improving Long-Read Somatic Structural Variant Calling with Pangenome and De Novo Personal Genome Assembly

Qian Qin, Jakob Heinz, Heng Li
openalex   +1 more source

From Association to Causality: Next-Generation GWAS, Pangenomes, and Multi-Omics Driving Gene Discovery and Precision Breeding in Cereal Crops. [PDF]

Biology (Basel)
Youssef HM, Helmi RY, Börner A, Sakr MM, El-Soda M.   +4 more
europepmc   +1 more source

Supplementary Table 2 from Improving Long-Read Somatic Structural Variant Calling with Pangenome and De Novo Personal Genome Assembly

Qian Qin, Jakob Heinz, Heng Li
openalex   +1 more source

gaftools: a toolkit for analyzing and manipulating pangenome alignments. [PDF]

Bioinformatics
Pani S, Dabbaghie F, Marschall T, Söylev A.   +3 more
europepmc   +1 more source

Data from Improving Long-Read Somatic Structural Variant Calling with Pangenome and De Novo Personal Genome Assembly

Qian Qin, Jakob Heinz, Heng Li
openalex   +1 more source