Results 171 to 180 of about 11,936 (226)

Pangenome-based association testing between a structural variant located upstream of the KIT gene and head depigmentation across a diverse panel of cattle breeds. [PDF]

Genet Sel Evol
Sorin V, Sanchez MP, Drouilhet L, Tosser-Klopp G, Naji MM, Boichard D, Pausch H, Boussaha M, Leonard AS.   +8 more
europepmc   +1 more source

The pangenome of <i>Acanthopagrus</i> provides genomic variation evidence for genetic diversity. [PDF]

iScience
Hu Y, Wang W, Wang H, Gao Z, Zhu X, Yang Y, Lu J.   +6 more
europepmc   +1 more source

Combining pangenomics and population genetics finds chromosomal re-arrangements, diversified chromosome segments, copy number variations and transposon polymorphisms in wheat and rye powdery mildew. [PDF]

PLoS Pathog
Sotiropoulos AG, Müller MC, Kunz L, Graf JP, Kiss L, Hückelhoven R, Schlagenhauf E, Keller B, Wicker T.   +8 more
europepmc   +1 more source

Assembly of a pangenome uncovers novel non-reference unique insertion sequences in cattle highlighting their genetic diversity. [PDF]

J Anim Sci Biotechnol
Sorin V, Besnard F, Capitan A, Grohs C, Naji MM, Escouflaire C, Fritz S, Lledo J, Eché C, Iampietro C, Donnadieu C, Milan D, Drouilhet L, Tosser-Klopp G, Boichard D, Klopp C, Sanchez MP, Boussaha M.   +17 more
europepmc   +1 more source

Genome-Informed Identification of Species-Specific Diagnostic Markers for Listeria Using Pangenome Analysis. [PDF]

Pathogens
Osei V, Kuufire E, Nyarku R, Bentum KE, James T, Elrefaey A, Samuel T, Abebe W.   +7 more
europepmc   +1 more source

Phased-assembly-driven pangenome graphs for structural variant genotyping and complex trait mapping in dairy cattle. [PDF]

Nat Commun
Yang L, Gao Y, Kuhn KL, Bhowmik N, Li W, Zanton G, Fang L, Cole JB, Li C, Baldwin Vi RL, Van Tassell CP, Rosen BD, Ma L, Smith TPL, Liu GE.   +14 more
europepmc   +1 more source

A sorghum pangenome reference improves global crop trait discovery. [PDF]

Nature
Morris GP, Harder AM, Healey AL, McLaughlin CM, Rifkin JL, Cruet-Burgos C, Jenkins JW, Shu S, Spiekerman JJ, VanGessel CJ, Agnew E, Audebert A, Barry K, Baxter I, Beurier G, Boston LB, Boyles RE, Brady SM, Bunting V, Chaparro JM, Courtney C, Dembele JSB, Deshpande S, Diatta C, Eck N, Eveland AL, Faye JM, Flowers D, Fonceka D, Gano B, de Gracia Coquerel M, Goodstein D, Grimwood J, Hudson ME, Kholova J, Johnson K, Johnson KK, Kawa D, Kouressy M, Kresovich S, Lee S, Lemaux PG, Lowery R, Luquet D, Maina F, Mamidi S, McKay JK, Michael TP, Mindaye TT, Mullet J, Ozersky P, Plott C, Prenni JE, Pressoir G, Rami JF, Rife TW, Saxton J, Sine B, Sreedasyam A, Talag J, Teme N, Tuinstra MR, Vadez V, Vogel JP, Walstead R, Wang J, Webber J, Williams M, Xu Y, Mockler TC, Lasky JR, Rice BR, Schmutz J, Shakoor N, Lovell JT.   +74 more
europepmc   +1 more source

Exploratory Insights on Epidemiology, Genomic Features and Pangenome Analysis of NDM-1-Positive Carbapenem-Resistant <i>Acinetobacter baumannii</i> Isolates from Costa Rica. [PDF]

Antibiotics (Basel)
Molina-Mora JA, Cascante-Serrano D, Quirós-Rojas L, González-Carballo GC, Araya X, Segura-Retana E, Estrada-Murillo H, Lozada-Alvarado S, Alvarado-Rodríguez M, Alfaro-Camacho J, García-Santamaría F.   +10 more
europepmc   +1 more source

Assembling unmapped reads reveals hidden variation in South Asian genomes. [PDF]

Nat Commun
Das A, Biddanda A, McCoy RC, Schatz MC.
europepmc   +1 more source