Results 51 to 60 of about 1,282 (176)

A gentle introduction to pangenomics. [PDF]

Brief Bioinform
Abstract Pangenomes have emerged in response to limitations associated with traditional linear reference genomes. In contrast to a traditional reference that is (usually) assembled from a single individual, pangenomes aim to represent all of the genomic variation found in a group of organisms.
Matthews CA, Watson-Haigh NS, Burton RA, Sheppard AE.   +3 more
europepmc   +3 more sources

Recent advances in the genomics of sugarcane (Saccharum)

Journal of Integrative Plant Biology, EarlyView.
This review systematically summarizes advances in sugarcane genomics, evolution, classification, and breeding practices. It identifies key research bottlenecks and proposes an integrated research framework to facilitate predictive sugarcane breeding, which provides valuable references for genetic improvement of other complex polyploid crops.
Tianyou Wang, Qin Zhang, Qiutao Xu, Han Zhao, Zhen Li, Jisen Zhang   +5 more
wiley   +1 more source

Molecular insights and translational opportunities to enhance heat tolerance in rice

The Plant Genome, Volume 19, Issue 3, September 2026.
Abstract Heat stress is an increasingly serious threat to rice (Oryza sativa L.) productivity, yet the genetic and regulatory architecture underlying thermotolerance remain poorly resolved and fragmented across studies. Earlier research focused on individual pathways or specific developmental stages; however, recent advances now support an integrated ...
Prabhat Rana, Chanderkant Chaudhary, Rajat Pruthi, Mansi Sharma, Bhupinderjeet Singh, Ravi Kiran Reddy Kondi, Mallesham Bulle, Prasanta K. Subudhi   +7 more
wiley   +1 more source

The ageing holobiont: crosstalk between telomere dynamics, oxidative stress and the gut microbiome

Biological Reviews, Volume 101, Issue 4, Page 1877-1903, August 2026.
ABSTRACT The gut tissue is at the frontline of early onset of ageing. It exhibits high cell turnover rates and rapid telomere shortening, which can have systemic effects on the developing or senescing organism. We conducted a literature review of studies on the crosstalk between telomere length dynamics, telomerase activity, oxidative stress, and gut ...
Michael L. Pepke, Søren B. Hansen, Morten T. Limborg   +2 more
wiley   +1 more source

Understanding Host–Pathogen Interactions in Brassica napus in the Omics Era

Plants, 2020
Brassica napus (canola/oilseed rape/rapeseed) is an economically important crop, mostly found in temperate and sub-tropical regions, that is cultivated widely for its edible oil.
Ting Xiang Neik, Junrey Amas, Martin Barbetti, David Edwards, Jacqueline Batley   +4 more
doaj   +1 more source

Development and analytical validation of a targeted short‐read next generation sequencing‐based pharmacogenetic panel for comprehensive variant detection

British Journal of Pharmacology, Volume 183, Issue 16, Page 4735-4760, August 2026.
Abstract Background and Purpose Genomic profiling of patients for genetic variants that modify the effect of specific medications has many benefits, including the possibility of avoiding toxicities and ensuring an adequate effect of the medication. Our intention was to develop a comprehensive, high‐quality pharmacogenetic test panel for clinical use ...
Anna Gréen, Nils Johan Fredriksson, Michael Andresen, Jon Jonasson, Malin Lindqvist Appell, Henrik Gréen   +5 more
wiley   +1 more source

Genomic, Transcriptomic and Epigenomic Tools to Study the Domestication of Plants and Animals: A Field Guide for Beginners

Frontiers in Genetics, 2020
In the last decade, genomics and the related fields of transcriptomics and epigenomics have revolutionized the study of the domestication process in plants and animals, leading to new discoveries and new unresolved questions. Given that some domesticated
Josué Barrera-Redondo, Daniel Piñero, Luis E. Eguiarte   +2 more
doaj   +1 more source

The Trichinella Super‐Pangenome Reveals the Evolution of Encapsulation and Predicted Host–Parasite Protein Interactions

Advanced Science, Volume 13, Issue 37, 3 July 2026.
ABSTRACT The muscle capsule of Trichinella is a critical structure that impedes immune attacks and drug penetration, yet the molecular mechanisms underlying its formation remain poorly understood. Using a high‐quality super‐pangenome comprising 12 Trichinella species, we compared extensive genomic variations between encapsulating and non‐encapsulating ...
Qingbo Lv, Yi Liu, Ning Xu, Xiao Zhang, Yaming Yang, Chengyao Li, Hanhai Mao, Mingyuan Liu, Xiaolei Liu   +8 more
wiley   +1 more source

The Multi‐Omics Opportunity to Improve Heat Adaptation in Chickpea

Food and Energy Security, Volume 15, Issue 4, July/August 2026.
ABSTRACT Heat stress during reproductive development is a critical constraint to chickpea (Cicer arietinum L.) productivity in major growing regions, where high temperatures cause yield losses through flower and pod abortion, reduced pollen viability and impaired grain filling.
Callum Jamie, Shanice van Haeften, Lee T. Hickey, Karine Chenu, Millicent R. Smith   +4 more
wiley   +1 more source

Chemical Speciation Defines Archaeal Ammonia‐Oxidizer Distribution in Yellowstone Hot Springs

Journal of Geophysical Research: Biogeosciences, Volume 131, Issue 7, July 2026.
Abstract The hot springs of Yellowstone National Park (YNP) provide a natural laboratory for investigating the influence of chemical speciation and energy availability on the distribution of microbes. Among 133 inorganic chemotrophic energy supplies, total dissolved ammonia oxidation was consistently one of the highest across 63 YNP hot spring samples.
Katelyn Weeks, Elizabeth Trembath‐Reichert, Jordyn Robare, R. Vince Debes II, Alta E. G. Howells, Everett Shock   +5 more
wiley   +1 more source