Results 131 to 140 of about 344,397 (313)

RCSB Protein Data Bank: supporting research and education worldwide through explorations of experimentally determined and computationally predicted atomic level 3D biostructures

IUCrJ
The Protein Data Bank (PDB) was established as the first open-access digital data resource in biology and medicine in 1971 with seven X-ray crystal structures of proteins.
Stephen K. Burley, Dennis W. Piehl, Brinda Vallat, Christine Zardecki   +3 more
doaj   +1 more source

Pdb models

Cryo-EM structures of Wzm ...
openaire   +1 more source

A Critical Guide to the PDB

, 2018
This Critical Guide in the Introduction to Bioinformatics series provides a brief outline of the Protein Data Bank – the PDB – the world’s primary repository of biological macromolecular structures. The rationale for creating the resource and the kinds of information it provides are discussed, and issues relating to its evolution and growth are ...
Attwood, Teresa, Foundation, GOBLET
openaire   +1 more source

Cysteine Redox State Governs the Condensation Pathway of Hendra Virus W Protein and Differentially Impacts Type I IFN and NF‐κB Signaling

Advanced Science, EarlyView.
The cysteine redox state of the Hendra virus W (WHeV) protein controls assembly into fibrils or amorphous aggregates, with residues 2–29 required for fibrillation. In cells, WHeV forms different types of nuclear condensates. Impaired ability to form redox‐sensitive, non‐filamentous condensates reduces WHeV inhibition of the NF‐κB pathway, while it ...
Frank Gondelaud, Alexandre Lalande, Giulia Pesce, Auriane Bouchet, Carole Meunier, Christophe Bignon, Denis Ptchelkine, Yu Gu, Eva Ogire, Pierre‐Yves Lozach, Denis Gerlier, Cyrille Mathieu, Sonia Longhi   +12 more
wiley   +1 more source

Showing the A) Binding Free energy and B) total complex energy of Quercetin-3-O-phosphate in complex with CK2 kinase (PDB ID: 1JWH), Ran-importin β (PDB ID: 1IBR), nerve growth factor (PDB ID: 1SG1), survivin structure (PDB ID: 1XOX), CRK-II (PDB ID: 2DVJ), tRNA dihydrouridine synthase 2 (PDB ID: 4XP7), and Human AKR1B10 (PDB ID: 4XZL).

Showing the A) Binding Free energy and B) total complex energy of Quercetin-3-O-phosphate in complex with CK2 kinase (PDB ID: 1JWH), Ran-importin β (PDB ID: 1IBR), nerve growth factor (PDB ID: 1SG1), survivin structure (PDB ID: 1XOX), CRK-II (PDB ID ...
Tahani Bakhsh (20037072), Abeer Al Tuwaijri (14693359), Misbahuddin Rafeeq (22403656), Majidah Aljadani (24375549), Hadeel A. Alsufyani (7959881), Najat Binothman (13798900), Alaa Hamed Habib (12472107), Maryam Abdulrahman Alahdal (24375546), Nawal Helmi (9612913), Maryam A. AL-Ghamdi (24375552), Hadil Alahdal (18437292)   +10 more
core   +1 more source

Molecular Editing Reveals a Bilobalide Chemotype that Attenuates Prolyl Endopeptidase (PREP)‐Linked Neuroinflammation

Advanced Science, EarlyView.
Molecular editing of bilobalide uncovers BB56, a PREP‐engaging chemotype with enhanced anti‐inflammatory activity in microglia. Integrated CETSA‐MS, SAR, and pathway analyses link BB56 to attenuation of p38 MAPK/NF‐κB and NLRP3‐associated inflammatory signaling, highlighting bilobalide editing as a strategy for developing neuroinflammation‐modulating ...
Chanin Sillapachaiyaporn, Wenjing Wang, Yao Qin, Lili Yan, Stephan Scheeff, Xu He, Qiong Wu, Yue Lin, Jinsai Shang, Xin Ye, Jing Liu, Kailei Sun, Chun Wai Yeung, Junzhe Huang, Zhenghui Chen, Xiaodong Liu, Yiqun Geng, Shannon Wing Ngor Au, Bonaventure Y. Ip, Ho Ko, Billy Wai‐Lung Ng   +20 more
wiley   +1 more source

The 'new' PDB [PDF]

Nature Structural Biology, 1998
openaire   +2 more sources

3D and 2d Interaction Diagram of WaterMap computation on Quercetin-3-O-phosphate in complex with A) CK2 kinase (PDB ID: 1JWH), B) Ran-importin β (PDB ID: 1IBR), C) Human NGF (PDB ID: 1SG1), D) Human survivin (PDB ID: 1XOX), E) CRK-II (PDB ID: 2DVJ), F) tRNA dihydrouridine synthase 2 (PDB ID: 4XP7), and G) Human AKR1B10 (PDB ID: 4XZL).

3D and 2d Interaction Diagram of WaterMap computation on Quercetin-3-O-phosphate in complex with A) CK2 kinase (PDB ID: 1JWH), B) Ran-importin β (PDB ID: 1IBR), C) Human NGF (PDB ID: 1SG1), D) Human survivin (PDB ID: 1XOX), E) CRK-II (PDB ID: 2DVJ), F ...
Tahani Bakhsh (20037072), Abeer Al Tuwaijri (14693359), Misbahuddin Rafeeq (22403656), Majidah Aljadani (24375549), Hadeel A. Alsufyani (7959881), Najat Binothman (13798900), Alaa Hamed Habib (12472107), Maryam Abdulrahman Alahdal (24375546), Nawal Helmi (9612913), Maryam A. AL-Ghamdi (24375552), Hadil Alahdal (18437292)   +10 more
core   +1 more source

Mechanistic Understanding of Protein–MOF Integration Through Surfactant‐Driven Interfacial Design

Advanced Science, EarlyView.
This study reveals how surfactant‐driven interfacial design governs the assembly and stability of protein@MOF composites. Using lipid‐based nonionic surfactants, we modulate protein–MOF interactions to improve encapsulation efficiency, MOF crystallization, and catalytic performance.
Ehsan Rashidniyaghi, Mohammad Khavani, Carlie Coerver, Ruibin Liang, Raheleh Ravanfar   +4 more
wiley   +1 more source

Community structure of highly efficient phenol degrading bacteria and phenol metabolites

Gongye shui chuli
By using activated sludge from the anaerobic tank of a coking plant, a highly efficient phenol-degrading bacterial (PDB) community was successfully obtained through separation and domestication, and its effect on microbial degradation of phenol was ...
XU Lingli, LIU Yuxiang, DONG Jing, REN Li, WANG Wenjun, YUAN Ke   +5 more
doaj   +1 more source