Results 61 to 70 of about 326,099 (315)

pdb

, 2017
PDB file WT.pdb contains the last frame from 10 ns molecular dynamics simulation alpha7-AChBP chimera (PDB 3SQ6). Only two adjacent subunits were subjected to simulations.
Hollmann, Michael, Methfessel, Christoph, Werner, Markus, Shelukhina, Irina, Spirova, Ekaterina, Ojomoko, Lucy, Tsetlin, Victor, Kudryavtsev, Denis   +7 more
core   +1 more source

sj-pdb-7-ctc-10.1177_25152564231211976 - Supplemental material for Phylogenetic and Structural Analyses of VPS13 Proteins in Archaeplastida Reveal Their Complex Evolutionary History in Viridiplantae

, 2023
Supplemental material, sj-pdb-7-ctc-10.1177_25152564231211976 for Phylogenetic and Structural Analyses of VPS13 Proteins in Archaeplastida Reveal Their Complex Evolutionary History in Viridiplantae by Sébastien Leterme, Olivier Bastien, Riccardo Aiese ...
Olivier Bastien (7815), Riccardo Aiese Cigliano (4511068), Sébastien Leterme (17463020), Morgane Michaud (17463023), Alberto Amato (3950006)   +4 more
core   +1 more source

Degradation mechanism of the von Willebrand factor A2 domain by nattokinase

FEBS Letters, EarlyView.
Nattokinase, a natto‐derived protease, exhibits potent antithrombotic effects. This study demonstrates that nattokinase directly cleaves the von Willebrand factor (vWF) A2 domain in vitro. Unlike the native regulator ADAMTS13, nattokinase degrades folded vWF independently of shear stress.
Ryuichi Hyakumoto, Masatomo So, Ayako Furukawa, Kenji Sugase   +3 more
wiley   +1 more source

Pengaruh Populasi, Jumlah Pemotongan, Hasil Produksi Ternak terhadap Produk Domestik Bruto (PDB), dan Penanaman Modal Dalam Negeri (PMDN)

Jurnal Ilmiah Ilmu-Ilmu Peternakan
Latar Belakang: Pembangunan peternakan berkelanjutan menjadi hal utama terhadap faktor pengembangan peternakan. Pengembangan usaha peternakan berkaitan langsung dengan populasi ternak di Indonesia.
Hartati Hartati, Awal Indut Prakasa, Nur Kholis, Ihsan Hilmi   +3 more
doaj   +1 more source

Modulation of Homer1 EVH1 domain internal dynamics by putative autism‐associated mutations

FEBS Letters, EarlyView.
The putative autism‐associated M65I and S97L variants of the EVH1 domain of the postsynaptic scaffold protein Homer1 do not exhibit substantial changes in their overall structure or partner binding. Both of them, but especially the M65I variant, show altered internal dynamics relative to the wild‐type domain on the μs‐ms timescale, indicated by the ...
Fanni Farkas, Brigitta Maruzs, Zsófia E. Kálmán, Tomas Klumpler, Gyula Batta, Bálint Péterfia, Zoltán Gáspári   +6 more
wiley   +1 more source

An unexpected alternative viologen electron mediator site in tungsten‐containing formate dehydrogenase

FEBS Letters, EarlyView.
An unexpected alternative interaction site for ethyl viologen was identified in formate dehydrogenase 1 from Methylorubrum extorquens. Combined mutagenesis, kinetic analysis, and docking revealed that aromatic residues near an iron–sulfur cluster enable flavin mononucleotide‐independent electron transfer, offering a framework for engineering improved ...
Eleni G. Poloniataki, Yong Hwan Kim
wiley   +1 more source

pdb-tools: a swiss army knife for molecular structures [version 1; referees: 2 approved]

F1000Research, 2018
The pdb-tools are a collection of Python scripts for working with molecular structure data in the Protein Data Bank (PDB) format. They allow users to edit, convert, and validate PDB files, from the command-line, in a simple but efficient manner.
João P. G. L. M. Rodrigues, João M.C. Teixeira, Mikaël Trellet, Alexandre M. J. J. Bonvin   +3 more
doaj   +1 more source

Electron transfer between complexes III and IV in S. cerevisiae mitochondrial membranes

FEBS Letters, EarlyView.
Mitochondrial oxidative phosphorylation in S. cerevisiae mitoplasts is limited by complex IV catalytic capacity, rather than two‐dimensional cytochrome c diffusion. At physiological cytochrome c : supercomplex ratios at salinity equivalent to that of 20 mm monovalent salt, activity is maximized, indicating that this low ionic strength accurately mimics
Ana Paula Lobez, Mikael Oliveberg, Peter Brzezinski   +2 more
wiley   +1 more source

Monostotic Paget’s disease of bone – literature review and case report

Rheumatology, 2019
Paget’s disease of bone (PDB) is a localized, chronic bone metabolic disorder, characterized by an osteoclastic malfunction, causing increased bone resorption and subsequent compensatory creation of new bone with a defective microstructure.
Piotr Wysiński, Magdalena Krajewska-Włodarczyk   +1 more
doaj   +1 more source

Annotating Macromolecular Complexes in the Protein Data Bank: Improving the FAIRness of Structure Data

Scientific Data, 2023
Macromolecular complexes are essential functional units in nearly all cellular processes, and their atomic-level understanding is critical for elucidating and modulating molecular mechanisms.
Sri Devan Appasamy, John Berrisford, Romana Gaborova, Sreenath Nair, Stephen Anyango, Sergei Grudinin, Mandar Deshpande, David Armstrong, Ivanna Pidruchna, Joseph I. J. Ellaway, Grisell Díaz Leines, Deepti Gupta, Deborah Harrus, Mihaly Varadi, Sameer Velankar   +14 more
doaj   +1 more source