Genome Sequencing and Assembly Strategies and a Comparative Analysis of the Genomic Characteristics in Penaeid Shrimp Species [PDF]
Frontiers in Genetics, 2021 Penaeid shrimp (family Penaeidae) represents one of the most economically and ecologically important groups of crustaceans. However, their genome sequencing and assembly have encountered extreme difficulties during the last 20 years. In this study, based
Jianbo Yuan, Xiaojun Zhang, Fuhua Li
exaly +4 more sources
Environmental and climate variability drive population size of annual penaeid shrimp in a large lagoonal estuary. [PDF]
PLoS ONE, 2023 Species with short life spans frequently show a close relationship between population abundance and environmental variation making these organisms potential indicator species of climatic variability. White (Penaeus setiferus), brown (P.
Lela S Schlenker +4 more
doaj +2 more sources
Modulation of SREBP Expression and Fatty Acid Levels by Bacteria-Induced ER Stress Is Mediated by Hemocyanin in Penaeid Shrimp [PDF]
Marine Drugs, 2023 Many environmental and pathogenic insults induce endoplasmic reticulum (ER) stress in animals, especially in aquatic ecosystems, where these factors are crucial for life.
Zishu Huang +7 more
doaj +2 more sources
Ubiquitination as an Important Host-Immune Response Strategy in Penaeid Shrimp: Inferences From Other Species [PDF]
Frontiers in Immunology, 2021 Shrimp aquaculture is an essential economic venture globally, but the industry faces numerous challenges, especially pathogenic infections. As invertebrates, shrimp rely mainly on their innate immune system for protection. An increasing number of studies
Zhaoxue Zhang +14 more
doaj +2 more sources
Simple sequence repeats drive genome plasticity and promote adaptive evolution in penaeid shrimp [PDF]
Communications Biology, 2021 This study focuses on the role of simple sequence repeats (SSRs) in the evolution of the genomes of two penaeid shrimp species, Fenneropenaeus chinensis and Litopenaeus vannamei.
Jianbo Yuan +15 more
doaj +2 more sources
Identification of penaeid shrimp from Chilika Lake through DNA barcoding [PDF]
Mitochondrial DNA. Part B. Resources, 2018 Chilika Lake is one of the prolific habitats of shrimps in India and offers tons of commercial trading every year. The genetic diversity of penaeid shrimp species in this oldest and largest brackish water lagoon is unknown so far.
Shantanu Kundu +4 more
doaj +2 more sources
Biochemical characterization of the cyclooxygenase enzyme in penaeid shrimp. [PDF]
PLoS ONE, 2021 Cyclooxygenase (COX) is a two-step enzyme that converts arachidonic acid into prostaglandin H2, a labile intermediate used in the production of prostaglandin E2 (PGE2) and prostaglandin F2α (PGF2α).
Punsa Tobwor +11 more
doaj +2 more sources
Copy Number Variations in Short Tandem Repeats Modulate Growth Traits in Penaeid Shrimp Through Neighboring Gene Regulation [PDF]
AnimalsPenaeid shrimp, with its genomes enriched in short tandem repeats (STRs), presents an ideal model for studying the distribution and biological functions of STRs.
Hao Zhou +15 more
doaj +2 more sources
Transcriptomic study of WSSV infection in Litopenaeus vannamei lymphoid organ via single nuclei RNA sequencing. [PDF]
PLoS ONEBackgroundAquaculture is the fastest growing farmed food sector and is a key part of global food security. Crustacean aquaculture, while being one of the most profitable sectors, is threatened by pathogenic diseases such as white spot disease (WSD ...
Alexandra Florea +9 more
doaj +2 more sources
Feeding habits of four-finger threadfin fish, Eleutheronema tetradactylum, and its diet interaction with co-existing fish species in the coastal waters of Thailand [PDF]
PeerJ, 2023 This study assessed the feeding habits of four-finger threadfin fish, Eleutheronema tetradactylum, and its diet relationship with other fish species in the tropics. Fish samples were collected from four locations along the coastal regions of Thailand.
Teuku Haris Iqbal +5 more
doaj +2 more sources