Photonic band structure design using persistent homology
The machine learning technique of persistent homology classifies complex systems or datasets by computing their topological features over a range of characteristic scales. There is growing interest in applying persistent homology to characterize physical
Daniel Leykam, Dimitris G. Angelakis
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Relational Persistent Homology for Multispecies Data with Application to the Tumor Microenvironment [PDF]
Topological data analysis (TDA) is an active field of mathematics for quantifying shape in complex data. Standard methods in TDA such as persistent homology (PH) are typically focused on the analysis of data consisting of a single entity (e.g., cells or ...
Bernadette J. Stolz +5 more
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A Framework for Fast and Stable Representations of Multiparameter Persistent Homology Decompositions [PDF]
Topological data analysis (TDA) is an area of data science that focuses on using invariants from algebraic topology to provide multiscale shape descriptors for geometric data sets such as point clouds.
David Loiseaux +2 more
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Stability and machine learning applications of persistent homology using the Delaunay-Rips complex [PDF]
Persistent homology (PH) is a robust method to compute multi-dimensional geometric and topological features of a dataset. Because these features are often stable under certain perturbations of the underlying data, are often discriminating, and can be ...
Amisha Mishra, Francis C. Motta
semanticscholar +1 more source
Representability of algebraic topology for biomolecules in machine learning based scoring and virtual screening. [PDF]
This work introduces a number of algebraic topology approaches, including multi-component persistent homology, multi-level persistent homology, and electrostatic persistence for the representation, characterization, and description of small molecules and
Zixuan Cang, Lin Mu, Guo-Wei Wei
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Promises and pitfalls of topological data analysis for brain connectivity analysis
Developing sensitive and reliable methods to distinguish normal and abnormal brain states is a key neuroscientific challenge. Topological Data Analysis, despite its relative novelty, already generated many promising applications, including in ...
Luigi Caputi +2 more
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Persistent Homology Meets Object Unity: Object Recognition in Clutter [PDF]
Recognition of occluded objects in unseen and unstructured indoor environments is a challenging problem for mobile robots. To address this challenge, we propose a new descriptor, Topological features Of Point cloud Slices (TOPS), for point clouds ...
Ekta U. Samani, A. Banerjee
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Object-oriented persistent homology [PDF]
Persistent homology provides a new approach for the topological simplification of big data via measuring the life time of intrinsic topological features in a filtration process and has found its success in scientific and engineering applications. However, such a success is essentially limited to qualitative data classification and analysis.
Wang, Bao, Wei, Guo-Wei
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Leveraging Persistent Homology Features for Accurate Defect Formation Energy Predictions via Graph Neural Networks [PDF]
In machine-learning-assisted high-throughput defect studies, a defect-aware latent representation of the supercell structure is crucial for the accurate prediction of defect properties.
Zhenyao Fang, Qimin Yan
semanticscholar +1 more source
Modeling of persistent homology [PDF]
Topological Data Analysis (TDA) is a novel statistical technique, particularly powerful for the analysis of large and high dimensional data sets. Much of TDA is based on the tool of persistent homology, represented visually via persistence diagrams.
Agami, Sarit, Adler, Robert J.
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