Results 11 to 20 of about 1,167,222 (309)

Phylogenetic Typology [PDF]

open access: yesFrontiers in Psychology, 2021
In this article we propose a novel method to estimate the frequency distribution of linguistic variables while controlling for statistical non-independence due to shared ancestry. Unlike previous approaches, our technique uses all available data, from language families large and small as well as from isolates, while controlling for different degrees of
Jäger, Gerhard, Wahle, Johannes
openaire   +4 more sources

Microbial Phylogenetic Context Using Phylogenetic Outlines [PDF]

open access: yesGenome Biology and Evolution, 2021
Abstract Microbial studies typically involve the sequencing and assembly of draft genomes for individual microbes or whole microbiomes. Given a draft genome, one first task is to determine its phylogenetic context, that is, to place it relative to the set of related reference genomes.
Caner Bagci   +3 more
openaire   +3 more sources

Polyploid phylogenetics [PDF]

open access: yesNew Phytologist, 2021
SummaryPolyploidy is a dominant feature of extant plant diversity. However, major research questions, including whether polyploidy is important to long‐term evolution or is just ‘evolutionary noise’, remain unresolved due to difficulties associated with the generation and analysis of data from polyploid lineages.
openaire   +2 more sources

Phylogenetic reconciliation

open access: yesPLOS Computational Biology, 2022
In phylogenetics, reconciliation is an approach to connect the history of two or more coevolving biological entities. The general idea of reconciliation is that a phylogenetic tree representing the evolution of an entity (e.g. homologous genes, symbionts…) can be drawn within another phylogenetic tree representing an encompassing entity (respectively ...
Menet, Hugo   +2 more
openaire   +4 more sources

Phylogenetic context using phylogenetic outlines [PDF]

open access: yes, 2021
AbstractMicrobial studies typically involve the sequencing and assembly of draft genomes for individual microbes or whole microbiomes. Given a draft genome, one first task is to determine its phylogenetic context, that is, to place it relative to the set of related reference genomes.
Caner Bagci   +3 more
openaire   +1 more source

Labellable Phylogenetic Networks

open access: yesBulletin of Mathematical Biology, 2023
Abstract Phylogenetic networks are mathematical representations of evolutionary history that are able to capture both tree-like evolutionary processes (speciations) and non-tree-like ‘reticulate’ processes such as hybridization or horizontal gene transfer.
Andrew Francis, Mike Steel
openaire   +4 more sources

Robust Phylogenetic Regression

open access: yesSystematic Biology, 2022
Abstract Modern comparative biology owes much to phylogenetic regression. At its conception, this technique sparked a revolution that armed biologists with phylogenetic comparative methods (PCMs) for disentangling evolutionary correlations from those arising from hierarchical phylogenetic relationships.
Richard Adams   +3 more
openaire   +3 more sources

Phylogenetic Factor Analysis [PDF]

open access: yesSystematic Biology, 2017
51 pages (42 main, 9 supplemental), 9 figures (5 main, 4 supplemental), 4 tables (2 main, 2 supplemental), submitted to Systematic ...
Tolkoff, Max R.   +4 more
openaire   +5 more sources

Spatial Factors Outperform Local Environmental and Geo-Climatic Variables in Structuring Multiple Facets of Stream Macroinvertebrates’ β-Diversity

open access: yesAnimals, 2022
One of the key targets of community ecology and biogeography concerns revealing the variability and underlying drivers of biodiversity. Most current studies understand biodiversity based on taxonomic information alone, but few studies have shown the ...
Naicheng Wu   +5 more
doaj   +1 more source

Functional Characterization of MaZIP4, a Gene Regulating Copper Stress Tolerance in Mulberry (Morus atropurpurea R.)

open access: yesLife, 2022
ZIP4 (zinc transporter 4) plays important roles in transporting Cu2+ ions in plants, which may contribute to the maintenance of plant metal homeostasis in growth, plant development and normal physiological metabolism.
Yisu Shi   +8 more
doaj   +1 more source

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