Results 61 to 70 of about 1,369,061 (328)
Visualizing Co-Phylogenetic Reconciliations [PDF]
, 2017 We introduce a hybrid metaphor for the visualization of the reconciliations of co-phylogenetic trees, that are mappings among the nodes of two trees. The typical application is the visualization of the co-evolution of hosts and parasites in biology.
Calamoneri, Tiziana +3 more
core +2 more sources
Comparative Phylogenetic Perspectives on the Evolutionary Relationships in the Brine Shrimp Artemia Leach, 1819 (Crustacea: Anostraca) Based on Secondary Structure of ITS1 Gene [PDF]
Journal of Genetic Resources, 2018 This is the first study on phylogenetic relationships in the genus Artemia Leach, 1819 using the pattern and sequence of secondary structures of internal transcribed spacer 1 (ITS1).
Alireza Asem, Pu Wang, Shi-Chun Sun
doaj +1 more source
phytools 2.0: an updated R ecosystem for phylogenetic comparative methods (and other things)
bioRxiv, 2023 Phylogenetic comparative methods comprise the general endeavor of using an estimated phylogenetic tree (or set of trees) to make secondary inferences: about trait evolution, diversification dynamics, biogeography, community ecology, and a wide range of ...
L. Revell
semanticscholar +1 more source
Microorganisms, 2019 Ganoderma boninense causes basal stem rot (BSR) and is responsible for substantial economic losses to Southeast Asia’s palm oil industry. Sarawak, a major producer in Malaysia, is also affected by this disease.
Frazer Midot +8 more
doaj +1 more source
Learnable Topological Features for Phylogenetic Inference via Graph Neural Networks [PDF]
arXiv, 2023 Structural information of phylogenetic tree topologies plays an important role in phylogenetic inference. However, finding appropriate topological structures for specific phylogenetic inference tasks often requires significant design effort and domain expertise.
arxiv
TreeView: an application to display phylogenetic trees on personal computers
Comput. Appl. Biosci., 1996 TreeView is a simple, easy to use phylogenetic tree viewing utility that runs under both MacOS (on Apple Macintosh computers) and under Microsoft Windows on Intel based computers, the two most common personal computers used by biologists.
R. Page
semanticscholar +1 more source
Philosophical Transactions of the Royal Society of London. B, Biological Sciences, 1989 A new statistical method called the phylogenetic regression is proposed that applies multiple regression techniques to cross-species data. It allows continuous and categorical variables to be tested for and controlled for. The new method is valid despite the problem that phylogenetically close species tend to be similar, and is designed to be used when
openaire +3 more sources
Spaces of phylogenetic networks from generalized nearest-neighbor interchange operations [PDF]
, 2015 Phylogenetic networks are a generalization of evolutionary or phylogenetic trees that are used to represent the evolution of species which have undergone reticulate evolution.
Huber, Katharina T. +3 more
core +1 more source
Molecular biology and evolution, 2012 In phylogenetic analyses of molecular sequence data, partitioning involves estimating independent models of molecular evolution for different sets of sites in a sequence alignment.
R. Lanfear +3 more
semanticscholar +1 more source
Cophenetic metrics for phylogenetic trees, after Sokal and Rohlf [PDF]
, 2013 Phylogenetic tree comparison metrics are an important tool in the study of evolution, and hence the definition of such metrics is an interesting problem in phylogenetics.
Cardona, Gabriel +4 more
core +2 more sources