Results 11 to 20 of about 1,270,722 (367)
A Comprehensive Phylogenetic Analysis of Deadenylases [PDF]
Evolutionary Bioinformatics, 2013 Deadenylases catalyze the shortening of the poly(A) tail at the messenger ribonucleic acid (mRNA) 3′-end in eukaryotes. Therefore, these enzymes influence mRNA decay, and constitute a major emerging group of promising anti-cancer pharmacological targets.
Athanasia Pavlopoulou +3 more
doaj +6 more sources
A format for phylogenetic placements [PDF]
, 2012 We have developed a unified format for phylogenetic placements, that is, mappings of environmental sequence data (e.g. short reads) into a phylogenetic tree. We are motivated to do so by the growing number of tools for computing and post-processing phylogenetic placements, and the lack of an established standard for storing them.
A Kluge +20 more
arxiv +8 more sources
Phylogenetic Analysis of Lednice Orthobunyavirus [PDF]
Microorganisms, 2019 Lednice virus (LEDV) has been detected in Culex modestus mosquitoes in several European countries within the last six decades. In this study, phylogenetic analyses of the complete genome segments confirm that LEDV belongs to the Turlock orthobunyavirus ...
Rebeka Lucijana Berčič +7 more
doaj +5 more sources
Phylogenetic analysis of otospiralin protein
Advanced Biomedical Research, 2016 Background: Fibrocyte-specific protein, otospiralin, is a small protein, widely expressed in the central nervous system as neuronal cell bodies and glia.
Ibrahim Torktaz +2 more
doaj +4 more sources
Information and Phylogenetic Systematic Analysis [PDF]
Information, 2015 Information in phylogenetic systematic analysis has been conceptualized, defined, quantified, and used differently by different authors. In this paper, we start with the Shannon Uncertainty Measure information measure I, applying it to cladograms ...
Walter Craig, Jonathon Stone
doaj +3 more sources
A Bayesian Phylogenetic Hidden Markov Model for B Cell Receptor Sequence Analysis [PDF]
, 2019 The human body is able to generate a diverse set of high affinity antibodies, the soluble form of B cell receptors (BCRs), that bind to and neutralize invading pathogens. The natural development of BCRs must be understood in order to design vaccines for highly mutable pathogens such as influenza and HIV.
Dhar, Amrit +3 more
arxiv +6 more sources
SICLE: A high-throughput tool for extracting evolutionary relationships from phylogenetic trees [PDF]
, 2013 We present the phylogeny analysis software SICLE (Sister Clade Extractor), an easy-to-use, high- throughput tool to describe the nearest neighbors to a node of interest in a phylogenetic tree as well as the support value for the relationship. The application is a command line utility that can be embedded into a phylogenetic analysis pipeline or can be ...
DeBlasio, Dan, Wiscaver, Jennifer
arxiv +4 more sources
Phylogenetic Analysis of allopolyploid species [PDF]
Czech Journal of Genetics and Plant Breeding, 2005 G. Petersen, O. Seberg
doaj +2 more sources
Phylogenetic Factor Analysis [PDF]
Systematic Biology, 2017 51 pages (42 main, 9 supplemental), 9 figures (5 main, 4 supplemental), 4 tables (2 main, 2 supplemental), submitted to Systematic ...
Tolkoff, Max R +4 more
openaire +6 more sources
Root Digger: a root placement program for phylogenetic trees
BMC Bioinformatics, 2021 Background In phylogenetic analysis, it is common to infer unrooted trees. However, knowing the root location is desirable for downstream analyses and interpretation.
Ben Bettisworth, Alexandros Stamatakis
doaj +1 more source