Results 11 to 20 of about 423,945 (289)
A Phylogenetic Analysis of the Globins in Fungi [PDF]
PLoS ONE, 2012 All globins belong to one of three families: the F (flavohemoglobin) and S (sensor) families that exhibit the canonical 3/3 α-helical fold, and the T (truncated 3/3 fold) globins characterized by a shortened 2/2 α-helical fold. All eukaryote 3/3 hemoglobins are related to the bacterial single domain F globins.
Hoogewijs, D +4 more
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Automated analysis of phylogenetic clusters [PDF]
BMC Bioinformatics, 2013 As sequence data sets used for the investigation of pathogen transmission patterns increase in size, automated tools and standardized methods for cluster analysis have become necessary. We have developed an automated Cluster Picker which identifies monophyletic clades meeting user-input criteria for bootstrap support and maximum genetic distance within
Ragonnet-Cronin, Manon +6 more
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Phylogenetic analysis of the mycoplasmas. [PDF]
Proceedings of the National Academy of Sciences, 1980 The phylogenetic relationships between the mycoplasmas and bacteria have been established from a comparative analysis of their 16S rRNA oligonucleotide catalogs. The genera Mycoplasma, Spiroplasma, and Acholeplasma arose by degenerative evolution, as a deep branch of the subline of clostridial ancestry that led to Bacillus and Lactobacillus ...
L. Zablen, Carl R. Woese, J Maniloff
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Acta Societatis Botanicorum Poloniae, 2023 Lycium barbarum L. ( L. barbarum ), an important medicinal and food crop from the Solanaceae family, is known for excellent tolerance to saline–alkaline and drought stresses. Therefore, it has significant research and application value.
Cuiping Guan +4 more
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On the analysis of phylogenetically paired designs [PDF]
Ecology and Evolution, 2015 AbstractAs phylogenetically controlled experimental designs become increasingly common in ecology, the need arises for a standardized statistical treatment of these datasets. Phylogenetically paired designs circumvent the need for resolved phylogenies and have been used to compare species groups, particularly in the areas of invasion biology and ...
Funk, Jennifer L. +2 more
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Molecular and Phylogenetic Analysis of Sheep Pox Virus in Iraq
Journal of Pure and Applied Microbiology, 2018 Sheep and goat pox (SGPX) are systemic transmissible viral diseases characterized mainly by skin and internal lesions. This work aimed to provide the first molecular detection of sheep pox virus (SPV) in Iraq.
Mohammed J. Muhaidi +2 more
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Phylogenetic Analysis of Gene Expression [PDF]
Integrative and Comparative Biology, 2013 14 pages, 4 ...
Casey W. Dunn, Zhijin Wu, Xi Luo
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Jumpstarting phylogenetic analysis
International Journal of Bioinformatics Research and Applications, 2006 Phylogenetic analysis is a central tool in studies of comparative genomics. When a new region of DNA is isolated and sequenced, researchers are often forced to throw away months of computation on an existing phylogeny of homologous sequences in order to incorporate this new sequence.
Todd S. Freestone +5 more
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Phylogenetic Analysis of the SNORD116 Locus [PDF]
Genes, 2017 The SNORD116 small nucleolar RNA locus (SNORD116@) is contained within the long noncoding RNA host gene SNHG14 on human chromosome 15q11-q13. The SNORD116 locus is a cluster of 28 or more small nucleolar (sno) RNAs; C/D box (SNORDs). Individual RNAs within the cluster are tandem, highly similar sequences, referred to as SNORD116-1, SNORD116-2, etc ...
Matthew Kocher, Deborah Good
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Microbiology Spectrum, 2021 Cyanobacteria and cyanophages are present widely in both freshwater and marine environments. However, freshwater cyanophages remain unknown largely due to the small numbers of cyanophage isolates despite their ecological and environmental significance ...
Dong Zhang +2 more
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