Results 21 to 30 of about 23,479,758 (331)

Phylogenetic analysis of eIF4E-family members

BMC Evolutionary Biology, 2005
Background Translation initiation in eukaryotes involves the recruitment of mRNA to the ribosome which is controlled by the translation factor eIF4E. eIF4E binds to the 5'-m7Gppp cap-structure of mRNA.
Maeder Dennis L, Lee Kibwe, Joshi Bhavesh, Jagus Rosemary   +3 more
doaj   +1 more source

Characterization of the complete mitochondrial genome of Cerogria popularis Borchmann, 1936 (Coleoptera: Tenebrionidae)

Mitochondrial DNA. Part B. Resources, 2022
In this study, we sequenced the complete mitochondrial genome (mitogenome) of Cerogria popularis Borchmann, 1936 based on the Illumina platform. The circular DNA molecule is 16,175 bp in size, including the 37 typical animal mitochondrial genes and a non-
Tongtong Liu, Jiansheng Qiu, Yuekai Wu, Kai Hu   +3 more
doaj   +1 more source

Phylogenetic Analysis of Gene Expression [PDF]

Integrative and Comparative Biology, 2013
14 pages, 4 ...
Dunn, Casey W., Luo, Xi, Wu, Zhijin
openaire   +3 more sources

Phylogenetic analysis of SARS-CoV-2 in Boston highlights the impact of superspreading events

Science, 2020
Phylogenetics of superspreading One important characteristic of coronavirus epidemiology is the occurrence of superspreading events. These are marked by a disproportionate number of cases originating from often-times asymptomatic individuals.
J. Lemieux, K. Siddle, Bennett M. Shaw, C. Loreth, S. Schaffner, A. Gladden-Young, Gordon C Adams, Timelia Fink, C. Tomkins-Tinch, L. Krasilnikova, K. DeRuff, Melissa Rudy, Matthew R. Bauer, K. A. Lagerborg, Erica Normandin, S. Chapman, Steven K. Reilly, Melis N. Anahtar, Aaron E. Lin, Amber Carter, C. Myhrvold, Molly E Kemball, Sushma Chaluvadi, C. Cusick, Katelyn Flowers, A. Neumann, Felecia Cerrato, M. Farhat, D. Slater, J. Harris, J. Branda, D. Hooper, Jessie M. Gaeta, Travis P. Baggett, J. O'Connell, A. Gnirke, Tami D. Lieberman, A. Philippakis, Meagan Burns, Catherine M. Brown, J. Luban, E. Ryan, S. Turbett, R. Larocque, W. Hanage, G. Gallagher, L. Madoff, S. Smole, Virginia M. Pierce, E. Rosenberg, Pardis C Sabeti, Daniel J. Park, B. MacInnis   +52 more
semanticscholar   +1 more source

Genomic characterization and phylogenetic analysis of SARS‐COV‐2 in Italy

medRxiv, 2020
This report describes the isolation, the molecular characterization and the phylogenetic analysis of the first three complete genomes of SARS-CoV-2 isolated from three patients involved in the first outbreak of COVID-19 in Lombardy, Italy.
G. Zehender, A. Lai, A. Bergna, L. Meroni, A. Riva, C. Balotta, M. Tarkowski, A. Gabrieli, D. Bernacchia, S. Rusconi, G. Rizzardini, S. Antinori, M. Galli   +12 more
semanticscholar   +1 more source

Complete mitochondrial genome of ocellated blenny, Opisthocentrus ocellatus (Tilesius, 1811) (Zoarcales: Opisthocentidae)

Mitochondrial DNA. Part B. Resources, 2019
The complete mitochondrial genome (mitogenome) of Opisthocentrus ocellatus (Zoarcales: Opisthocentridae) was sequenced for the first time. The whole genome was 16,525 bp in length and contained 13 protein-coding genes, 22 transfer RNA genes (tRNA), two ...
Olesia A. Rutenko, Sergei V. Turanov, Yuri Ph. Kartavtsev   +2 more
doaj   +1 more source

Phylogeny.fr: robust phylogenetic analysis for the non-specialist

Nucleic Acids Res., 2008
Phylogenetic analyses are central to many research areas in biology and typically involve the identification of homologous sequences, their multiple alignment, the phylogenetic reconstruction and the graphical representation of the inferred tree.
Alexis Dereeper, V. Guignon, Guillaume Blanc, S. Audic, S. Buffet, F. Chevenet, Jean-François Dufayard, Stéphane Guindon, Vincent Lefort, Magali Lescot, Jean-Michel Claverie, Olivier Gascuel   +11 more
semanticscholar   +1 more source

Phylogenetic Analysis of SARS-CoV-2 Data Is Difficult

bioRxiv, 2020
Numerous studies covering some aspects of SARS-CoV-2 data analyses are being published on a daily basis, including a regularly updated phylogeny on nextstrain.org.
Benoit Morel, P. Barbera, Lucas Czech, Ben Bettisworth, Lukas Hübner, S. Lutteropp, Dora Serdari, E. Kostaki, I. Mamais, Alexey M. Kozlov, P. Pavlidis, D. Paraskevis, A. Stamatakis   +12 more
semanticscholar   +1 more source

Phylogenetic analysis of all available monkeypox virus strains shows the close relatedness of contemporary ones

Heliyon, 2023
The present research aimed to evaluate the diversity of all monkeypox virus strains with a special focus on recently isolated ones by a comprehensive phylogenetic analysis of all available sequences, based on the concatenate of four viral genes.
Mária Benkő, Balázs Harrach, Győző L. Kaján   +2 more
doaj   +1 more source

Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins

Nucleic Acids Research, 2014
The emergence of new sequencing technologies has facilitated the use of bacterial whole genome alignments for evolutionary studies and outbreak analyses.
N. Croucher, A. Page, T. Connor, Aidan J. Delaney, Jacqueline A. Keane, S. Bentley, J. Parkhill, S. Harris   +7 more
semanticscholar   +1 more source