Results 21 to 30 of about 1,270,722 (367)
Mitochondrial DNA. Part B. Resources, 2021 We determined a complete mitochondrial genome of Episoriculus leucops. This mitogenome is a circular molecule with 16,838 bp in length, containing 13 protein-coding genes, 22 transfer RNA genes (tRNA), and two ribosomal RNA genes (rRNA).
Dan Chen +4 more
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Phylogenetic analysis of the spirochetes [PDF]
Journal of Bacteriology, 1991 The 16S rRNA sequences were determined for species of Spirochaeta, Treponema, Borrelia, Leptospira, Leptonema, and Serpula, using a modified Sanger method of direct RNA sequencing. Analysis of aligned 16S rRNA sequences indicated that the spirochetes form a coherent taxon composed of six major clusters or groups. The first group, termed the treponemes,
Thad B. Stanton +9 more
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A Phylogenetic Analysis of the Globins in Fungi [PDF]
PLoS ONE, 2012 All globins belong to one of three families: the F (flavohemoglobin) and S (sensor) families that exhibit the canonical 3/3 α-helical fold, and the T (truncated 3/3 fold) globins characterized by a shortened 2/2 α-helical fold. All eukaryote 3/3 hemoglobins are related to the bacterial single domain F globins.
Hoogewijs, D +4 more
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Automated analysis of phylogenetic clusters [PDF]
BMC Bioinformatics, 2013 As sequence data sets used for the investigation of pathogen transmission patterns increase in size, automated tools and standardized methods for cluster analysis have become necessary. We have developed an automated Cluster Picker which identifies monophyletic clades meeting user-input criteria for bootstrap support and maximum genetic distance within
Ragonnet-Cronin, Manon +6 more
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Phylogenetic analysis of the mycoplasmas. [PDF]
Proceedings of the National Academy of Sciences, 1980 The phylogenetic relationships between the mycoplasmas and bacteria have been established from a comparative analysis of their 16S rRNA oligonucleotide catalogs. The genera Mycoplasma, Spiroplasma, and Acholeplasma arose by degenerative evolution, as a deep branch of the subline of clostridial ancestry that led to Bacillus and Lactobacillus ...
L. Zablen, Carl R. Woese, J Maniloff
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Microbiology Spectrum, 2021 Cyanobacteria and cyanophages are present widely in both freshwater and marine environments. However, freshwater cyanophages remain unknown largely due to the small numbers of cyanophage isolates despite their ecological and environmental significance ...
Dong Zhang +2 more
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On the analysis of phylogenetically paired designs [PDF]
Ecology and Evolution, 2015 AbstractAs phylogenetically controlled experimental designs become increasingly common in ecology, the need arises for a standardized statistical treatment of these datasets. Phylogenetically paired designs circumvent the need for resolved phylogenies and have been used to compare species groups, particularly in the areas of invasion biology and ...
Funk, Jennifer L. +2 more
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Phylogenetic Analysis of Gene Expression [PDF]
Integrative and Comparative Biology, 2013 14 pages, 4 ...
Casey W. Dunn, Zhijin Wu, Xi Luo
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Molecular and Phylogenetic Analysis of Sheep Pox Virus in Iraq
Journal of Pure and Applied Microbiology, 2018 Sheep and goat pox (SGPX) are systemic transmissible viral diseases characterized mainly by skin and internal lesions. This work aimed to provide the first molecular detection of sheep pox virus (SPV) in Iraq.
Mohammed J. Muhaidi +2 more
doaj +1 more source
Statistical Phylogenetic Tree Analysis Using Differences of Means [PDF]
, 2010 We propose a statistical method to test whether two phylogenetic trees with given alignments are significantly incongruent. Our method compares the two distributions of phylogenetic trees given by the input alignments, instead of comparing point ...
Arnaoudova, Elissaveta +6 more
core +3 more sources