Results 21 to 30 of about 855,866 (324)
Jumpstarting phylogenetic analysis
International Journal of Bioinformatics Research and Applications, 2006 Phylogenetic analysis is a central tool in studies of comparative genomics. When a new region of DNA is isolated and sequenced, researchers are often forced to throw away months of computation on an existing phylogeny of homologous sequences in order to incorporate this new sequence.
Todd S. Freestone +5 more
openaire +4 more sources
Phylogenetic Analysis of the SNORD116 Locus [PDF]
Genes, 2017 The SNORD116 small nucleolar RNA locus (SNORD116@) is contained within the long noncoding RNA host gene SNHG14 on human chromosome 15q11-q13. The SNORD116 locus is a cluster of 28 or more small nucleolar (sno) RNAs; C/D box (SNORDs). Individual RNAs within the cluster are tandem, highly similar sequences, referred to as SNORD116-1, SNORD116-2, etc ...
Matthew Kocher, Deborah Good
openaire +3 more sources
Phylogenetic inferences of Atelinae (Platyrrhini) based on multi-directional chromosome painting in Brachyteles arachnoides, Ateles paniscus paniscus and Ateles b. marginatus [PDF]
, 2005 We performed multi-directional chromosome painting in a comparative cytogenetic study of the three Atelinae species Brachyteles arachnoides, Ateles paniscus paniscus and Ateles belzebuth marginatus, in order to reconstruct phylogenetic relationships ...
C. Nagamachi +17 more
core +1 more source
rbrothers: R Package for Bayesian Multiple Change-Point Recombination Detection. [PDF]
, 2013 Phylogenetic recombination detection is a fundamental task in bioinformatics and evolutionary biology. Most of the computational tools developed to attack this important problem are not integrated into the growing suite of R packages for statistical ...
Chattopadhyay, Sujay +3 more
core +3 more sources
Phylogenetic analysis of Harmonin homology domains
BMC Bioinformatics, 2021 Background Harmonin Homogy Domains (HHD) are recently identified orphan domains of about 70 residues folded in a compact five alpha-helix bundle that proved to be versatile in terms of function, allowing for direct binding to a partner as well as ...
Baptiste Colcombet-Cazenave +6 more
doaj +1 more source
Past and future of a century old Citrus tristeza virus collection: a California citrus germplasm tale. [PDF]
, 2013 Citrus tristeza virus (CTV) isolates collected from citrus germplasm, dooryard and field trees in California from 1914 have been maintained in planta under quarantine in the Citrus Clonal Protection Program (CCPP), Riverside, California. This collection,
Georgios eVidalakis +14 more
core +2 more sources
BOOL-AN: A method for comparative sequence analysis and phylogenetic reconstruction [PDF]
, 2009 A novel discrete mathematical approach is proposed as an additional tool for molecular systematics which does not require prior statistical assumptions concerning the evolutionary process.
Ari, Eszter +4 more
core +1 more source
Heliyon, 2023 The present research aimed to evaluate the diversity of all monkeypox virus strains with a special focus on recently isolated ones by a comprehensive phylogenetic analysis of all available sequences, based on the concatenate of four viral genes.
Mária Benkő +2 more
doaj +1 more source
Choreography of silk spinning by webspinners (Insecta: Embioptera) reflects lifestyle and hints at phylogeny [PDF]
, 2016 Silk spinning defines the morphologically constrained embiopterans. All individuals spin for protection, including immatures, adult males and the wingless females. Enlarged front tarsi are packed with silk glands and clothed with ejectors.
Edgerly-Rooks, Janice +2 more
core +2 more sources
The Hindwings of Ants: A Phylogenetic Analysis [PDF]
Psyche: A Journal of Entomology, 2019 In this study, we compare and analyze different ant taxa hindwing morphologies with phylogenetic hypotheses of the Family Formicidae (Hymenoptera). The hindwings are classified into three Typologies based on progressive veins reduction. This analysis follows a revision of the hindwing morphology in 291 extant and eight fossil genera.
Stefano Cantone, Claudio José Von Zuben
openaire +5 more sources