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Refuting phylogenetic relationships [PDF]

Biology Direct, 2006
Background Phylogenetic methods are philosophically grounded, and so can be philosophically biased in ways that limit explanatory power. This constitutes an important methodologic dimension not often taken into account.
Bapteste Eric, Boucher Yan, Bucknam James   +2 more
doaj   +6 more sources

Phylogenetic relationships in the [PDF]

European Journal of Entomology, 2006
Phylogenetic relationships among Palaearctic Ribes and/or Onagraceae inhabiting Aphis species from five countries were examined using mitochondrial gene cytochrome oxidase I (CO-I) and nuclear gene elongation factor 1 α (EF-1α) sequences.
Jurga TURČINAVIČIENĖ, Rimantas RAKAUSKAS, Bo Vest PEDERSEN   +2 more
doaj   +2 more sources

Phylogenetic relationships of 'Polyalthia' in Fiji [PDF]

PhytoKeys, 2020
The genus Polyalthia (Annonaceae) has undergone dramatic taxonomic changes in recent years. Nine Polyalthia species have historically been recognized in Fiji, all of which have subsequently been transferred to three different genera, viz.
Bine Xue, Yanwen Chen, Richard M. K. Saunders   +2 more
doaj   +5 more sources

High-level phylogenetic relationships within Pezizomycotina revisited [PDF]

IMA Fungus
Here, we re-examine the high level phylogeny of Pezizomycotina with special attention to the recently proposed phylogenomic hypothesis (Díaz-Escandón et al.
Vadim Goremykin, Claudio Donati
doaj   +4 more sources

Advances of the phylogenetic relationships in gibbon [PDF]

ITM Web of Conferences, 2022
Gibbons are a family (Hylobatidae) of ape species endemic to the rainforests of the mainland and islands of Southeast Asia, including four well-recognized genera (Hylobates, Nomascus, Symphalangus, and Hoolock).
Li Qingqing, Li Momo, Guo Aiwei, Wang Qilin, Chen Fenfen, Liu Lili, Yang Yajing, Duan Yanqing   +7 more
doaj   +1 more source

The complete chloroplast genome sequence of Swertia japonica (Schult.) Makino (Gentianaceae)

Mitochondrial DNA. Part B. Resources, 2023
Swertia japonica (Schult.) Makino is a traditional medicinal plant in Japan for which the chloroplast genome has not been previously reported. The complete chloroplast genome of S. japonica was determined using a high-throughput sequencing technique. The
Watanabe Yoichi
doaj   +1 more source

Three Complete Mitochondrial Genomes of Erotylidae (Coleoptera: Cucujoidea) with Higher Phylogenetic Analysis

Insects, 2021
The family Erotylidae belongs to the superfamily Cucujoidea, which are phytophagous and mycophagous. So far, only two representative complete mitochondrial (mt) genomes of Erotylidae have been sequenced.
Jing Liu, Yuyu Wang, Ruyue Zhang, Chengmin Shi, Weicheng Lu, Jing Li, Ming Bai   +6 more
doaj   +1 more source

The complete chloroplast genome of Artocarpus altilis (Moraceae) and phylogenetic relationships

Mitochondrial DNA. Part B. Resources, 2021
The chloroplast (cp) is an essential organelle in higher plants. The genes of the plastome are well suited to infer phylogenetic relationships among taxa.
Ueric José Borges de Souza, Raíssa Nunes dos Santos, Renisson Neponuceno de Araújo Filho, Gil Rodrigues dos Santos, Renato Almeida Sarmento, Fabien De Bellis, Fabrício Souza Campos   +6 more
doaj   +1 more source

Phylogenetic Partitioning of Gansu Flora: Unveiling the Core Transitional Zone of Chinese Flora

Plants, 2023
Floristic regions, conventionally established using species distribution patterns, have often overlooked the phylogenetic relationships among taxa.
Zizhen Li, Qing Tian, Peifang Chong, Weibo Du, Jia Wei, Rong Huang   +5 more
doaj   +1 more source

DendroSSR: SSRs and sequence alignment as tools for building phylogeny trees

Brazilian Journal of Biology, 2023
This study introduces a new method to construct phylogenetic trees by combining both of the Simple Sequence Repeats (SSRs) and sequence alignments.
M. Alhawatema
doaj   +1 more source