Results 61 to 70 of about 542,876 (367)

A surrogate function for one-dimensional phylogenetic likelihoods

open access: yes, 2017
Phylogenetics has seen an steady increase in substitution model complexity, which requires increasing amounts of computational power to compute likelihoods.
Brian C Claywell   +4 more
core   +1 more source

The phylogenetic regression

open access: yesPhilosophical Transactions of the Royal Society of London. B, Biological Sciences, 1989
A new statistical method called the phylogenetic regression is proposed that applies multiple regression techniques to cross-species data. It allows continuous and categorical variables to be tested for and controlled for. The new method is valid despite the problem that phylogenetically close species tend to be similar, and is designed to be used when
openaire   +3 more sources

Molecular Phylogenetics

open access: yesEncyclopedia of Bioinformatics and Computational Biology, 2019
We report here the discovery of a remarkable new monotypic mygalomorph spider genus, known only from one geographical location along the central coast of California. The single relict species comprising Cryptocteniza kawtak n. gen. n. sp.

semanticscholar   +1 more source

Phylogenetics of Allopolyploids [PDF]

open access: yesAnnual Review of Ecology, Evolution, and Systematics, 2017
We give an overview of recently developed methods to reconstruct phylog-enies of taxa that include allopolyploids that have originated in relatively recent times—in other words, taxa for which at least some of the parental lineages of lower ploidy levels are not extinct and for which ploidy information is clearly shown by variation in chromosome counts.
Oxelman, Bengt   +5 more
openaire   +4 more sources

Positive selection and relaxed purifying selection contribute to rapid evolution of sex-biased genes in green seaweed Ulva

open access: yesBMC Ecology and Evolution
Background The evolution of differences in gamete size and number between sexes is a cornerstone of sexual selection theories. The green macroalga Ulva, with incipient anisogamy and parthenogenetic gametes, provides a unique system to investigate ...
Xiaojie Liu   +6 more
doaj   +1 more source

The noctuid moth Xylomoia graminea (Lepidoptera: Noctuidae) new to the Romanian fauna [PDF]

open access: yesTravaux du Muséum National d’Histoire Naturelle “Grigore Antipa”, 2020
In this paper, new data concerning the occurrence and distribution of Xylomoia graminea (Graeser, 1889) in Romania are given. Pictures of specimen and male genitalia are provided.
Constantin Corduneanu   +3 more
doaj   +3 more sources

Marginal Likelihoods in Phylogenetics: A Review of Methods and Applications [PDF]

open access: yesSystematic Biology, 2018
By providing a framework of accounting for the shared ancestry inherent to all life, phylogenetics is becoming the statistical foundation of biology.
Jamie R Oaks   +3 more
semanticscholar   +1 more source

Speciation Through the Lens of Population Dynamics: A Theoretical Primer on How Small and Large Populations Diverge

open access: yesPopulation Ecology, EarlyView.
Population size and dynamics fundamentally shape speciation by influencing genetic drift, founder events, and adaptive potential. Small populations may speciate rapidly due to stronger drift, whereas large populations harbor more genetic diversity, which can alter divergence trajectories. We highlight theoretical models that incorporate population size
Ryo Yamaguchi   +3 more
wiley   +1 more source

An Annealed Sequential Monte Carlo Method for Bayesian Phylogenetics. [PDF]

open access: yesSystematic Biology, 2018
We describe an "embarrassingly parallel" method for Bayesian phylogenetic inference, annealed Sequential Monte Carlo (SMC), based on recent advances in the SMC literature such as adaptive determination of annealing parameters.
Liangliang Wang   +2 more
semanticscholar   +1 more source

The multidrug and toxin extrusion (MATE) transporter DTX51 antagonizes non‐cell‐autonomous HLS1–AMP1 signaling in a region‐specific manner

open access: yesFEBS Letters, EarlyView.
The Arabidopsis mutants hls1 hlh1 and amp1 lamp1 exhibit pleiotropic developmental phenotypes. Although the functions of the causative genes remain unclear, they act in the same genetic pathway and are thought to generate non‐cell‐autonomous signals.
Takashi Nobusawa, Makoto Kusaba
wiley   +1 more source

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