Results 131 to 140 of about 6,751 (255)

Advancing FAIR phylogenetics for health threats: a systematic review of SARS‐CoV‐2 research and guidelines for future outbreaks

open access: yesCladistics, EarlyView.
Abstract During the COVID‐19 pandemic, the need for quick public health action often conflicted with the careful methods required in phylogenetics. To explore this, we reviewed 217 SARS‐CoV‐2 studies published from January 2020 to March 2025 in 121 journals.
Omkar Marne, Denis Jacob Machado
wiley   +1 more source

Clues of ancient incomplete lineage sorting during bivalve evolution undermine support for Heterodonta

open access: yesCladistics, EarlyView.
Abstract A long‐standing challenge in phylogenomics has been the resolution of relationships originated from ancient radiations. In these cases, phenomena such as incomplete lineage sorting can increase the support for conflicting resolutions. Most of the diversity in the Class Bivalvia originated during an Ordovician radiation; indeed, several deep ...
Alessandro Formaggioni   +7 more
wiley   +1 more source

The first mitochondrial genome for Sterictiphorinae (Hymenoptera: Argidae) and insights into argid phylogeny

open access: yesScientific Reports
The family Argidae is a significant group of agricultural and forest pests, yet its mitochondrial genome (mitogenome) diversity remains only partially understood.
Bia Park, Ui Wook Hwang
doaj   +1 more source

A revised classification system of the marronoid clade of spiders (Araneae), based on dense sampling phylogenomics and comparative morphology

open access: yesCladistics, EarlyView.
Abstract The marronoid clade is a globally distributed, ecologically diverse group of spiders. It is an important faunal component in both natural and synanthropic environments, and even found in aquatic and extreme habitats such as desert salt flats. The systematics of the marronoid clade has been notoriously unstable due to the widespread character ...
Jonas O. Wolff   +10 more
wiley   +1 more source

Importance of using genetic data to inform conservation captive breeding: A tale of two species of threatened macaws (Ara spp.)

open access: yesConservation Science and Practice, EarlyView.
Unmanaged captive populations of threatened species often harbor hidden genetic risks, so using genomic tools, we audited a large private macaw collection and uncovered extensive hybridization and high inbreeding. Our findings provide an actionable framework for how routine genetic screening can be used to mitigate these risks, manage captive breeding ...
George Olah   +4 more
wiley   +1 more source

1175. Madeirina macrorhiza (Lowe ex Hooker) D. J. Crawford, M. Seq., Mort & J. K. Kelly, gen. nov. et comb. nov.

open access: yesCurtis's Botanical Magazine, EarlyView.
Summary Tolpis Adanson is a genus of some 15 species distributed primarily in the Macaronesian archipelagos of the Azores, Canary Islands, Madeira, and Cape Verde Islands. A phylogenomic study resolved Tolpis as monophyletic with the Madeiran endemic species Tolpis macrorhiza sister to the remainder of the genus.
Daniel J. Crawford   +5 more
wiley   +1 more source

Alignment- and reference-free phylogenomics with colored de Bruijn graphs

open access: yes, 2019
Wittler R. Alignment- and reference-free phylogenomics with colored de Bruijn graphs. In: Huber K, Gusfield D, eds. Proceedings of WABI 2019. LIPIcs. Vol 143.
Wittler, Roland ; https://orcid.org/   +2 more
core   +1 more source

Insights into tandem dioxygenases—copper radical oxidases in fungal Phytopathogens of the Colletotrichum acutatum species complex

open access: yesThe FEBS Journal, EarlyView.
In Colletotrichum acutatum species complex, conserved ring‐cleavage dioxygenases located adjacent to AA5_2 enzymes were investigated as potential redox partners. Biochemical analyses identified the dioxygenases as intradiol‐cleaving enzymes preferentially oxidizing methyl‐substituted catechols, while AA5_2 enzymes displayed weak alcohol oxidase ...
Radka Končitíková   +7 more
wiley   +1 more source

Rescue of pATOM36‐depleted T. brucei by human MTCH1/2 reveals common features of protein insertases

open access: yesThe FEBS Journal, EarlyView.
Human MTCH1 and MTCH2 (with an N‐terminal extension) functionally complement the loss of pATOM36 in T. brucei, indicating that these evolutionarily distant proteins recognize a common set of substrates and share fundamental principles of mitochondrial outer membrane protein insertion. Structural analyses reveal a common hydrophilic cavity, supporting a
Stephan Berger   +4 more
wiley   +1 more source

Phylogenomics of Marine Algae

open access: yesMalaysian Journal of Science, 2013
De novo genome and transcriptome data from a number of marine algal species have recently become available, ranging from red, green and brown algae, as well as other photosynthetic eukaryotes, e.g. diatoms and dinoflagellates. Phylogenomic approaches are widely adopted to decipher the evolutionary relationships among diverse lineages.
openaire   +4 more sources

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