Results 151 to 160 of about 15,172 (305)

Recent advances in the genomics of sugarcane (Saccharum)

Journal of Integrative Plant Biology, EarlyView.
This review systematically summarizes advances in sugarcane genomics, evolution, classification, and breeding practices. It identifies key research bottlenecks and proposes an integrated research framework to facilitate predictive sugarcane breeding, which provides valuable references for genetic improvement of other complex polyploid crops.
Tianyou Wang, Qin Zhang, Qiutao Xu, Han Zhao, Zhen Li, Jisen Zhang   +5 more
wiley   +1 more source

Near‐infrared confocal imaging reveals the spatial organisation of far‐red photosynthesis in Shark Bay microbial mats and Halomicronema sp.

Journal of Microscopy, EarlyView.
Abstract Far‐red light (FRL) cyanobacteria occupy spectrally filtered habitats where visible wavelengths are depleted but far‐red radiation persists. Shark Bay (Western Australia) stromatolitic microbial mats provide such a habitat, containing subsurface cyanobacterial communities in which chlorophyll d/f (Chl d/f)‐containing phototrophs coexist with ...
Anya Salih, Katherina Petrou, Michael Johnson, Alexander M. Macmillan, Gareth Kindler, Brendan P. Burns, Unnikrishnan Kuzhiumparambil, Anthony W. D. Larkum   +7 more
wiley   +1 more source

Anchored phylogenomics unravels the evolution of spider flies (Acroceridae) and reveals discordance between nucleotides and amino acids

, 2018
Supplementary Material accompanying the manuscript titled "Anchored phylogenomics unravels the evolution of spider flies (Acroceridae) and reveals discordance between nucleotides and amino acids", including Supplementary Figures, Tables and Datasets.
Shin, Seunggwan (5045138), Yeates, David (5045156), Petersen, Malte (5045120), Kimsey, Lynn S (5045135), Winterton, Shaun L (5045132), Zhou, Xin (5045129), Bayless, Keith M (5045150), Khouri, Ziad (5045147), Mayer, Christoph (5045123), Borowiec, Marek L (5045126), Misof, Bernhard (5045144), Gillung, Jessica P (5045153), Wiegmann, Brian M (5045141)   +12 more
core   +1 more source

Ariadnema polymorpha gen. et sp. nov. (Scytonemataceae, Cyanobacteria): A new heterocytous cyanobacterium with true and false branching from ruins in the Brazilian Atlantic Forest

Journal of Phycology, EarlyView.
Abstract A novel heterocytous Cyanobacterium, Ariadnema polymorpha gen. et sp. nov., was observed in the northern Brazilian Atlantic Forest (BAF), a globally significant biodiversity hotspot that has microbiome diversity yet to be explored. Isolated from ancient sugarcane mill ruins within the BAF, the new genus (strain CCAPE130) exhibits a unique ...
Jefferson Vitor Melo Cabral, Haywood Dail Laughinghouse IV, Jonatas Mota Paulino, Watson Arantes Gama   +3 more
wiley   +1 more source

The Mathematics of Phylogenomics

, 2006
. The grand challenges in biology today are being shaped by powerful high-throughput technologies that have revealed the genomes of many organisms, global expression patterns of genes, and detailed information about variation within populations.
Lior Pachter, Bernd Sturmfels
core  

Genome‐scale insights into metabolic streamlining and photosynthetic energy balance in the extremophile green alga Picocystis salinarum (Picocystophyceae, Chlorophyta)

Journal of Phycology, EarlyView.
Abstract Picocystis salinarum is an early‐diverging chlorophyte and the sole described member of the Picocystophyceae, frequently dominating hypersaline and alkaline lakes despite extreme physicochemical constraints. To elucidate the genomic foundations of its ecological success, we generated a fully annotated, chromosome‐scale nuclear genome assembly ...
Claude Lemieux, Christian Otis, Monique Turmel   +2 more
wiley   +1 more source

Anchored phylogenomics unravels the evolution of spider flies (Diptera, Acroceridae) and reveals discordance between nucleotides and amino acids

, 2018
Supplementary Material accompanying the manuscript titled "Anchored phylogenomics unravels the evolution of spider flies (Acroceridae) and reveals discordance between nucleotides and amino acids", including Supplementary Figures, Tables and ...
Christoph Mayer, David Yeates, Ziad Khouri (5396777), Xin Zhou, Ziad Khouri, Brian M. Wiegmann, Malte Petersen (3183417), Keith M. Bayless (3265686), Brian M. Wiegmann (3265674), Malte Petersen, Lynn S. Kimsey, Shaun L. Winterton (7903985), Seunggwan Shin (3557783), Marek L. Borowiec (3255456), Christoph Mayer (57204), Shaun L. Winterton, Lynn S. Kimsey (5396774), Seunggwan Shin, Marek L. Borowiec, David Yeates (5396783), Bernhard Misof (153798), Jessica P. Gillung (5396780), Xin Zhou (54275), Bernhard Misof, Keith M. Bayless, Jessica P. Gillung   +25 more
core   +1 more source

Phylogenomics of the American robin (Turdus migratorius) reveals hidden lineages and introgression

Journal of Systematics and Evolution, EarlyView.
Phylogenomic analyses of Turdus migratorius uncover four previously unrecognized lineages, including a divergent Baja California lineage (T. m. confinis). The results reveal complex evolutionary relationships that depart from simple models of continuous divergence, supported by evidence of introgression between the Mexican lineage and its previously ...
Wendoly Rojas‐Abreu, Christen M. Bossu, Luz E. Zamudio‐Beltrán, Borja Milá, Kristen Ruegg, Blanca E. Hernández‐Baños   +5 more
wiley   +1 more source

California's vernal‐pool mousetails (Myosurus, Ranunculaceae): Phylogenetic analysis of ddRADseq data, hybridization tests, and species delimitation

Journal of Systematics and Evolution, EarlyView.
We present the first phylogenetic analysis of the Californian species of Myosurus. Our ddRADseq analysis reveals considerably more diversity than what was recognized in recent floristic treatments. Myosurus minimus subsp. apus was found to be a rare species restricted to Southern California and northwestern Baja California.
R. Douglas Stone, J. Travis Columbus, Aaron E. Sims   +2 more
wiley   +1 more source

A customizable gene selection and clustering software for phylogenomics and duplication/recombination analyses

, 2014
A bioinformatic algorithm based on graph representation of data was developed and allowed to create a customizable gene selection and clustering software for phylogenomics and duplication/recombination ...
C. Bandi, D. Sassera, F. Comandatore, S. Gaiarsa   +3 more
core   +1 more source