Optimal assembly strategies of transcriptome related to ploidies of eukaryotic organisms
BMC Genomics, 2015 BackgroundSeveral de novo transcriptome assemblers have been developed recently to assemble the short reads generated from the next-generation sequencing platforms and different strategies were employed for assembling transcriptomes of various eukaryotes
B. He +6 more
semanticscholar +1 more source
Interploidy gene flow involving the sexual-asexual cycle facilitates the diversification of gynogenetic triploid Carassius fish [PDF]
, 2021 クローン繁殖フナは稀に有性生殖をしながら繁栄 --遺伝的に多様なクローンフナが存在する謎を解明--. 京都大学プレスリリース. 2021-11-19.Asexual vertebrates are rare and at risk of extinction due to their restricted adaptability through the loss of genetic recombination.
Hashiguchi, Yasuyuki +11 more
core +1 more source
Frontiers in Plant Science, 2022 In most plant species, DNA repeated elements such as satellites and retrotransposons are composing the majority of their genomes. Saccharum officinarum (2n = 8x = 80) and S.
Kai Wang +6 more
doaj +1 more source
The thermodynamics of protein aggregation reactions may underpin the enhanced metabolic efficiency associated with heterosis, some balancing selection, and the evolution of ploidy levels [PDF]
Progress in Biophysics and Molecular Biology Volume 126, July
2017, Pages 1-21, 2015 Identifying the physical basis of heterosis (or hybrid vigor) has remained elusive despite over a hundred years of research on the subject. The three main theories of heterosis are dominance theory, overdominance theory, and epistasis theory.
arxiv +1 more source
Impact of dietary phosphorous in diploid and triploid Atlantic salmon (Salmo salar L.) with reference to early skeletal development in freshwater [PDF]
, 2018 In order to assess the effect of dietary phosphorus (P) in reducing vertebral malformations and improving freshwater (FW) performance in triploid Atlantic salmon (Salmo salar), both triploid and diploid Atlantic salmon were fed three different dietary P ...
Bozzolla, Pierre +6 more
core +1 more source
Changes in ploidy affect vascular allometry and hydraulic function in Mangifera indica trees.
The Plant Journal, 2021 The enucleated vascular elements of the xylem and the phloem offer an excellent system to test the effect of ploidy on plant function because variation in vascular geometry has a direct influence on transport efficiency.
M. Barceló-Anguiano +3 more
semanticscholar +1 more source
Chromosome Painting Provides Insights Into the Genome Structure and Evolution of Sugarcane
Frontiers in Plant Science, 2021 The genus Saccharum is composed of species with high polyploidy and highly varied chromosome numbers, laying a challenge for uncovering its genomic structure and evolution.
Zhuang Meng +8 more
doaj +1 more source
The hybrid number of a ploidy profile [PDF]
arXiv, 2021 Polyploidization, whereby an organism inherits multiple copies of the genome of their parents, is an important evolutionary event that has been observed in plants and animals. One way to study such events is in terms of the ploidy number of the species that make up a dataset of interest.
arxiv
A comparative study of the physiological responses of chronically stressed diploid and triploid Atlantic salmon (Salmo salar) [PDF]
, 2022 Rømt oppdrettslaks (Salmo salar) regnes for å være en av de største truslene som påføres ville populasjoner av Atlantisk laks grunnet introgressiv hybridisering. Dette kan unngås ved å indusere sterilitet i oppdrettslaksen, noe som er mulig i kommersiell
Muren, Brynjar
core
Autopolyploidy, allopolyploidy, and phylogenetic networks with horizontal arcs [PDF]
arXiv, 2022 Polyploidization is an evolutionary process by which a species acquires multiple copies of its complete set of chromosomes. The reticulate nature of the signal left behind by it means that phylogenetic networks offer themselves as a framework to reconstruct the evolutionary past of species affected by it.
arxiv