Results 71 to 80 of about 74,036 (282)

Haplotype threading: accurate polyploid phasing from long reads

Genome Biology, 2020
Resolving genomes at haplotype level is crucial for understanding the evolutionary history of polyploid species and for designing advanced breeding strategies.
Sven Schrinner, Rebecca Serra Mari, Jana Ebler, M. Rautiainen, Lancelot Seillier, J. Reimer, Bjöern Usadel, T. Marschall, G. Klau   +8 more
semanticscholar   +1 more source

Haplotype-Based Genotyping in Polyploids [PDF]

Frontiers in Plant Science, 2018
Accurate identification of polymorphisms from sequence data is crucial to unlocking the potential of high throughput sequencing for genomics. Single nucleotide polymorphisms (SNPs) are difficult to accurately identify in polyploid crops due to the duplicative nature of polyploid genomes leading to low confidence in the true alignment of short reads ...
Peggy Ozias-Akins, Josh Clevenger, Scott A. Jackson, Walid Korani   +3 more
openaire   +4 more sources

Identification of Three POMCa Genotypes in Largemouth Bass (Micropterus salmoides) and Their Differential Physiological Responses to Feed Domestication

Animals
Diverse feeding habits in teleosts involve a wide range of appetite-regulating factors. As an appetite-suppressing gene, the polymorphisms of POMCa in largemouth bass (Micropterus salmoides) were validated via sequencing and high-resolution melting (HRM).
Jie Hu, Jie Yang, Huan Zhong, Qifang Yu, Jun Xiao, Chun Zhang   +5 more
doaj   +1 more source

Creation of doubled haploid lines of maize Zea mays L. by resynthesis from a tetraploid population

Биотехнология и селекция растений, 2023
The search for new, effective methods for broadening the genetic polymorphism of the original breeding material remains one of important problems of hybrid maize breeding.
A. V. Ulyanov, D. S. Kutsev, V. V. Vasipov, Kh. R. Mamadova, M. Yu. Khakulova, S. F. Israfilova, M. R. Firsova, A. V. Karlov, E. B. Khatefov   +8 more
doaj   +1 more source

Characterization of duplicate gene evolution in the recent natural allopolyploid Tragopogon miscellus by next-generation sequencing and Sequenom iPLEX MassARRAY genotyping [PDF]

, 2010
The definitive version is available at www.blackwell-synergy ...
Adams, Adams, Adams, Ainouche, Barbazuk, Bottley, Buggs, Buggs, Buggs, Cannon, Chaisson, Chaudhary, Chen, Chen, Cheung, Cheung, Cook, Cook, Dong, Doyle, Dunstan, Ellegren, Elmer, Emrich, Eveland, Feldman, Ferguson, Flagel, Flagel, Gabriel, Gaeta, Goetz, Guo, Gut, Harr, Hegarty, Hegarty, Hillier, Holt, Hudson, Johnson, Joly, Judd, Kashkush, Kihara, Kim, Kim, Kovarik, Kwok, Levy, Lim, Lim, Liu, Lynch, Margulies, Marth, Matyasek, Mavrodiev, Novaes, Novak, Ownbey, Pavy, Petit, Quackenbush, Renaut, Sadava, Slate, Soltis, Soltis, Soltis, Soltis, Soltis, Song, Stebbins, Stupar, Swanson-Wagner, Tate, Tate, Tate, Udall, Van Bers, Van Tassell, Vera, Wang, Wang, Whittall, Wolf   +86 more
core   +1 more source

A framework for gene mapping in wheat demonstrated using the Yr7 yellow rust resistance gene [PDF]

, 2020
We used three approaches to map the yellow rust resistance gene Yr7 and identify associated SNPs in wheat. First, we used a traditional QTL mapping approach using a double haploid (DH) population and mapped Yr7 to a low-recombination region of chromosome
Bansept-Basler, Pauline, El-Soda, Mohamed, Gardiner, Laura-Jayne, Hall, Anthony, O'Sullivan, Donal M.   +4 more
core   +3 more sources

Mice With Increased Numbers of Polyploid Hepatocytes Maintain Regenerative Capacity but Develop Fewer Tumors Following Chronic Liver Injury.

Gastroenterology, 2020
BACKGROUND & AIMS Thirty to ninety percent of hepatocytes contain whole-genome duplications, but little is known about the fates or functions of these polyploid cells or how they affect development of liver disease.
Yu-Hsuan Lin, Shuyuan Zhang, Min Zhu, Tianshi Lu, Kenian Chen, Zhuoyu Wen, Shidan Wang, Guanghua Xiao, Danni Luo, Yuemeng Jia, Lin Li, M. MacConmara, Y. Hoshida, A. Singal, A. Yopp, Tao Wang, Hao Zhu   +16 more
semanticscholar   +1 more source

A Tracing Model for the Evolutionary Equilibrium of Octoploids

Frontiers in Genetics, 2022
Testing Hardy-Weinberg equilibrium (HWE) is a fundamental approach for inferring population diversity and evolution, but its application to octoploids containing eight chromosome sets has not well been justified.
Jing Wang, Xuemin Lv, Li Feng, Ang Dong, Dan Liang, Rongling Wu   +5 more
doaj   +1 more source

A High-Density Linkage Map of the Forage Grass Eragrostis curvula and Localization of the Diplospory Locus

Frontiers in Plant Science, 2019
Eragrostis curvula (Schrad.) Nees (weeping lovegrass) is an apomictic species native to Southern Africa that is used as forage grass in semiarid regions of Argentina.
Diego Zappacosta, Jimena Gallardo, José Carballo, Mauro Meier, Juan Manuel Rodrigo, Cristian A. Gallo, Juan Pablo Selva, Juliana Stein, Juan Pablo A. Ortiz, Emidio Albertini, Viviana Echenique   +10 more
doaj   +1 more source

Celiac Immunogenic Potential of α-Gliadin Epitope Variants from Triticum and Aegilops Species [PDF]

, 2019
The high global demand of wheat and its subsequent consumption arise from the physicochemical properties of bread dough and its contribution to the protein intake in the human diet.
Barro Losada, Francisco, Comino Montilla, Isabel María, López Casado, Miguel Ángel, Moreno Amador, María de Lourdes, Ozuna Serafini, Carmen Victoria, Ruiz Carnicer, Ángela, Segura Montero, Verónica, Sousa Martín, Carolina, Torres López, María Isabel   +8 more
core   +1 more source