Results 61 to 70 of about 34,010 (264)

Metagenomics for Bacteriology [PDF]

open access: yes, 2015
The study of bacteria, or bacteriology, has gone through transformative waves since its inception in the 1600s. It all started by the visualization of bacteria using light microscopy by Antonie van Leeuwenhoek, when he first described “animalcules ...
del Castillo, Erika, Izard, Jacques
core   +1 more source

cuteHap: Haplotype‐Aware Structural Variant Detection in Phased Long‐Read Sequencing Data

open access: yesAdvanced Science, EarlyView.
cuteHap is a haplotype‐aware structural variant detection method designed for phased long‐read sequencing. By employing self‐adaptive clustering and credibility‐prioritized beam search algorithms, cuteHap generates accurate haplotype‐resolved calls and outperforms state‐of‐the‐art tools.
Shuqi Cao   +7 more
wiley   +1 more source

Polyploid lineages in the genus Porphyra [PDF]

open access: yes, 2018
Whole genome duplication is now accepted as an important evolutionary force, but the genetic factors and the life history implications affecting the existence and abundance of polyploid lineages within species are still poorly known.
Loureiro, João   +3 more
core   +1 more source

Unraveling the complex genome of Saccharum spontaneum using Polyploid Gene Assembler [PDF]

open access: yesDNA Research, 2019
The Polyploid Gene Assembler (PGA), developed and tested in this study, represents a new strategy to perform gene-space assembly from complex genomes using low coverage DNA sequencing. The pipeline integrates reference-assisted loci and de novo assembly strategies to construct high-quality sequences focused on gene content.
Nascimento, Leandro Costa   +12 more
openaire   +2 more sources

TRAP5 Inhibition Targeting Scar‐Associated Macrophages Ameliorates Acute Kidney Injury to Chronic Kidney Disease Transition

open access: yesAdvanced Science, EarlyView.
This study delineates macrophage heterogeneity along the acute kidney injury to chronic kidney disease transition. Single‐cell RNA sequencing reveals a TRAP5+ scar‐associated macrophage subset driven by Spp1–Cd44 signaling and mitochondrial metabolic reprogramming.
Chenxi Wang   +13 more
wiley   +1 more source

Hijacking a rapid and scalable metagenomic method reveals subgenome dynamics and evolution in polyploid plants

open access: yesApplications in Plant Sciences
Premise The genomes of polyploid plants archive the evolutionary events leading to their present forms. However, plant polyploid genomes present numerous hurdles to the genome comparison algorithms for classification of polyploid types and exploring ...
Gillian Reynolds   +3 more
doaj   +1 more source

Mining transcriptomic data to study the origins and evolution of a plant allopolyploid complex [PDF]

open access: yesPeerJ, 2014
Allopolyploidy combines two progenitor genomes in the same nucleus. It is a common speciation process, especially in plants. Deciphering the origins of polyploid species is a complex problem due to, among other things, extinct progenitors, multiple ...
Aureliano Bombarely   +2 more
doaj   +2 more sources

ZSL Orchestrates Synaptonemal Complex Assembly as a Central Region Scaffold to Ensure Synapsis Fidelity and Crossover Control in Polyploid Meiosis

open access: yesAdvanced Science, EarlyView.
A central molecular adaptor, ZSL, is identified that links transverse filaments ZYP1 to central element SCEP1/2 to drive synaptonemal complex assembly in Brassica napus. Loss of ZSL abolishes synaptonemal complex formation, disrupts meiotic chromosome segregation, and markedly increases crossovers, providing mechanistic insight into meiotic fidelity ...
Miaowei Geng   +16 more
wiley   +1 more source

REGISTRO DE POLIPLOIDIA EN LA ALMEJA DULCEACUICOLA MUSCULIUM ARGENTINUM (D'ORBIGNY 1835) (SPHAERIIDAE, VENEROIDA) RECORD OF POLYPLOIDY IN THE FRESHWATER CLAM MUSCULIUM ARGENTINUM (D'ORBIGNY 1835) (SPHAERIIDAE, VENEROIDA)

open access: yesGayana, 2005
La poliploidía es un carácter inusual en moluscos bivalvos. Sin embargo, datos citogenéticos documentados para especies de la subfamilia Sphaeriinae (familia Sphaeriidae) del hemisferio norte muestran números cromosómicos que varían desde 36 hasta ca ...
Pedro Jara-Seguel   +2 more
doaj  

The role of genomic structural variation in the genetic improvement of polyploid crops

open access: yesCrop Journal, 2019
Many of our major crop species are polyploids, containing more than one genome or set of chromosomes. Polyploid crops present unique challenges, including difficulties in genome assembly, in discriminating between multiple gene and sequence copies, and ...
Sarah-Veronica Schiessl   +4 more
doaj   +1 more source

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