Results 51 to 60 of about 29,969 (221)

Philympics 2021: Prophage Predictions Perplex Programs [PDF]

, 2021
Most bacterial genomes contain integrated bacteriophages—prophages—in various states of decay. Many are active and able to excise from the genome and replicate, while others are cryptic prophages, remnants of their former selves.
McNair, Katelyn, Inglis, Laura, Decewicz, Przemysław, Roach, Michael J, Pargin, Evan, Giles, Sarah K, Edwards, Robert A, Roux, Simon   +7 more
core   +1 more source

Interactions between the Prophage 919TP and Its Vibrio cholerae Host: Implications of gmd Mutation for Phage Resistance, Cell Auto-Aggregation, and Motility

Viruses, 2021
Prophage 919TP is widely distributed among Vibrio cholera and is induced to produce free φ919TP phage particles. However, the interactions between prophage φ919TP, the induced phage particle, and its host remain unknown.
Na Li, Yigang Zeng, Bijie Hu, Tongyu Zhu, Sine Lo Svenningsen, Mathias Middelboe, Demeng Tan   +6 more
doaj   +1 more source

Gene order in prophage P22 [PDF]

Virology, 1965
Peer Reviewed ; http://deepblue.lib.umich.edu/bitstream/2027.42/31973/1/0000015 ...
Smith, Hamilton O., Levine, Myron
openaire   +3 more sources

Biosurfactant production by Pseudomonas aeruginosa isolated from mining waste: From genomic analysis to development of a polymeric composite for removal of hexavalent chromium

Polymer International, EarlyView.
Biosurfactant was produced by Pseudomonas aeruginosa using andiroba waste from Amazonia. A biosurfactant–alginate composite (Alg/BioS) was successfully synthesized via ionotropic gelation, and achieved up to 70% Cr6+ removal from water. Abstract Environmental contamination by heavy metals represents a significant challenge due to their persistence in ...
Paulo Diniz Austriaco, Emilly Cruz da Silva, Glenda Sores Gomes, Joane Almeida Alves, Amanda Vidal, Leandro Argolo, Rafaela Ribeiro, Luciana Souza, José Augusto Pires Bitencourt, Leonardo Brasil Felipe, Leonie Asfora Sarubbo, Sidnei Cerqueira dos Santos   +11 more
wiley   +1 more source

Prophages are gut virome pioneers [PDF]

Nature Reviews Microbiology, 2020
A recent study shows that assembly of gut viral communities in early life occurs in distinct steps and is modulated by breastfeeding.
openaire   +2 more sources

Diagram of Y51MC23 prophage 1 and 2 versus Thermus sp. 2.9 prophage synteny.

, 2015
Annotated ORFs are shown as block arrows for Thermus aquaticus prophage 1 (top), prophage 2 (center), and Thermus sp. 2.9 (bottom). Gold indicates hypothetical ORFs; Green indicates ORFs shared between all three prophage; magenta indicates ORFs specific ...
Thomas Schoenfeld (268443), Brendan Keough (813167), Erin Ferguson (813169), David A. Mead (160260), Phillip J. Brumm (103434), Michael Lodes (813170), Scott Monsma (813166), Svetlana Jasinovica (813168)   +7 more
core   +1 more source

Time‐Resolved Effects of Cold Atmospheric Plasma on E. coli GW‐AmxH19 Transcriptome and Proteome in an Emulated Wastewater Environment

PROTEOMICS, EarlyView.
ABSTRACT Cold atmospheric plasma (CAP) is effective against a variety of microorganisms. Here, we described effects on an Escherichia coli strain isolated from hospital wastewater caused by treatment with physical plasma. E. coli GW‐AmxH19 was incubated in artificial wastewater and treated for 15 min with CAP.
Jörg Bernhardt, Dominik Schneider, Julia Rielicke, Susanne Sievers, Veronika Hahn, Mechthild Bömeke, Anja Poehlein, Dirk Albrecht, Juergen F. Kolb, Katharina Riedel, Rolf Daniel, Daniela Zühlke   +11 more
wiley   +1 more source

Host population structure and species resolution reveal prophage transmission dynamics

mBio
Much knowledge about bacteriophages has been obtained via genomics and metagenomics over the last decades. However, most studies dealing with prophage diversity have rarely conducted phage species delimitation (aspect 1) and have hardly integrated the ...
Karen Tenorio-Carnalla, Alejandro Aguilar-Vera, Alfredo J. Hernández-Alvarez, Gamaliel López-Leal, Valeria Mateo-Estrada, Rosa Isela Santamaria, Santiago Castillo-Ramírez   +6 more
doaj   +1 more source

Mycobacterium intracellulare M.i.198—A Promising Strain for Studying Pathogenesis of Nontuberculous Mycobacterial Pulmonary Disease (NTM‐PD)

Microbiology and Immunology, EarlyView.
ABSTRACT In this review, we introduce a promising strain for studying pathogenesis of nontuberculous mycobacterial pulmonary disease (NTM‐PD), Mycobacterium intracellulare M.i.198. M.i.198 was isolated from a patient with progressive Mycobacterium avium‐intracellulare complex pulmonary disease (MAC‐PD) in whom surgical operation was required to ...
Yoshitaka Tateishi, Ryoji Maekura, Yukiko Nishiuchi, Sohkichi Matsumoto   +3 more
wiley   +1 more source

Phigaro: high-throughput prophage sequence annotation

, 2020
Phigaro is a standalone command-line application that is able to detect prophage regions taking raw genome and metagenome assemblies as an input. It also produces dynamic annotated 'prophage genome maps' and marks possible transposon insertion spots ...
Zdobnov, Evgeny, Prianichnikov, Nikita A, Elizaveta V Starikova, Polina O Tikhonova, Evgeny M Zdobnov, Govorun, Vadim M, Ilina, Elena N, Chris M Rands, Elena N Ilina, Nikita A Prianichnikov, Starikova, Elizaveta V, Tikhonova, Polina O, Vadim M Govorun, Rands, Christopher   +13 more
core   +1 more source