Dissecting the Mechanism of (<i>R</i>)-3-Hydroxybutyrate Dehydrogenase by Kinetic Isotope Effects, Protein Crystallography, and Computational Chemistry. [PDF]
Machado TFG +7 more
europepmc +1 more source
Iterative phase retrieval in macromolecular crystal diffraction using the gradients of intensities
Incorporating molecular intensity gradients into an iterative projection algorithm enables model‐free electron‐density reconstruction even for low‐solvent macromolecular crystals.Iterative phase retrieval (IPR) offers a model‐independent route to crystallographic structure determination but is fundamentally limited by the sampling of the diffraction ...
Sebastian Bielfeldt +3 more
wiley +1 more source
TorchRef: an open‐source PyTorch framework for crystallographic refinement
TorchRef is an open‐source PyTorch‐based crystallographic refinement framework that exposes all refinable parameters to automatic differentiation, accelerates structure factor evaluation by about two orders of magnitude on a GPU and enables novel workflows such as direct refinement against amplitude differences in time‐resolved crystallography ...
Hans-Peter Seidel +2 more
wiley +1 more source
Deep learning applications in protein crystallography. [PDF]
Matinyan S, Filipcik P, Abrahams JP.
europepmc +1 more source
Correlative X‐ray imaging and fluorescence microscopy in hydrated environments
We present a combined imaging platform that integrates beamline‐compatible fluorescence microscopy with scanning small‐angle X‐ray scattering to enable sequential multimodal investigations of hydrated cells under near‐native conditions. We apply our method to ordered cytoskeletal structures in different cell types and demonstrate the direct correlation
Mangalika Sinha +8 more
wiley +1 more source
Scalable fabrication of an array-type fixed-target device for automated room temperature X-ray protein crystallography. [PDF]
Saha S +5 more
europepmc +1 more source
A compact on‐axis microscope installed on the endstation of the macromolecular crystallography beamline BM07 at the ESRF is described. The system combines dual‐magnification on‐axis sample visualization with on‐axis laser injection and fluorescence measurements in back‐scattering geometry.
Alexandre Appolaire +6 more
wiley +1 more source
The current status and future prospects of the Synchrotron Radiation Protein Crystallography Core Facility at NSRRC: a focus on the TPS 05A, TPS 07A and TLS 15A1 beamlines. [PDF]
Chou CK +7 more
europepmc +1 more source
ABSTRACT Allergic diseases arise from aberrant immune recognition of otherwise harmless environmental proteins and are driven by epitope‐specific interactions between allergens and the adaptive immune system. Although component‐resolved diagnostics have improved molecular characterisation of sensitization, they remain limited to whole‐allergen ...
Mark Møiniche +11 more
wiley +1 more source

