Results 11 to 20 of about 6,490,832 (265)

ABC proteins in evolution [PDF]

open access: yesFEBS Letters, 2020
ATP‐binding cassette (ABC) proteins play diverse roles in all living organisms, making them an attractive model for evolution. Early evolution of ancestral unicellular organisms entailed the acquisition of at least three types of ABC proteins: type 1 ABC proteins to import nutrients, and type 2 and 3 ABC proteins to generate the outer cell membrane by ...
Fumihiko Ogasawara   +2 more
openaire   +2 more sources

A system for the evolution of protein-protein interaction inducers [PDF]

open access: yes, 2021
Molecules that induce interactions between proteins, often referred to as “molecular glues”, are increasingly recognized as important therapeutic modalities and as entry points for rewiring cellular signaling networks.
Jeffrey, Dewey   +3 more
core   +2 more sources

Evolution of Ribosomal Proteins [PDF]

open access: yesEuropean Journal of Biochemistry, 1973
We have studied the evolution of ribosomal proteins over a spectrum of 13 species ranging from man to plants using a two‐dimensional polyacrylamide gel electrophoresis technique. We tried to quantify the proximity of these species by coelectrophoresing the proteins from various combinations of two species.
J, Delaunay, F, Creusot, G, Schapira
openaire   +3 more sources

Statistical Models of the Protein Fitness Landscape: Applications to Protein Evolution and Engineering [PDF]

open access: yes, 2012
Understanding the protein fitness landscape is important for describing how natural proteins evolve and for engineering new proteins with useful properties.
Romero, Philip Anthony
core   +1 more source

On the evolution of protein–adenine binding [PDF]

open access: yesProceedings of the National Academy of Sciences, 2020
Significance How proteins evolved to recognize and bind their ligands is a key mystery in protein function evolution. To explore this mystery, we study how proteins bind adenine, an ancient fragment. We characterize physicochemical patterns of protein–adenine interactions and link these to proteins’ evolutionary origins.
Aya Narunsky   +5 more
openaire   +3 more sources

Computationally Optimizing the Directed Evolution of Proteins [PDF]

open access: yes, 2003
Directed evolution has proven a successful strategy for protein engineering. To accelerate the discovery process, we have developed several computational methods to optimize the mutant libraries by targeting specific residues for mutagenesis, and ...
Voigt, Christopher Ashby
core   +1 more source

Exploring Protein Sequence Space Using Computationally Directed Recombination [PDF]

open access: yes, 2006
Evolution has provided us with many protein sequences. However, these sequences represent a very small fraction of the possible sequences. In the laboratory, scientists have explored areas of sequence space not represented by natural proteins both to ...
Meyer, Michelle Margaret
core   +1 more source

Studying protein-protein interactions using peptide arrays [PDF]

open access: yes, 2010
Screening of arrays and libraries of compounds is well-established as a high-throughput method for detecting and analyzing interactions in both biological and chemical systems. Arrays and libraries can be composed from various types of molecules, ranging
Rito, T.   +7 more
core   +1 more source

Initial mutations direct alternative pathways of protein evolution [PDF]

open access: yes, 2011
Whether evolution is erratic due to random historical details, or is repeatedly directed along similar paths by certain constraints, remains unclear. Epistasis (i.e.
J Arjan G M de Visser   +31 more
core   +2 more sources

Functional Evolution of Proteins [PDF]

open access: yesProteins: Structure, Function, and Bioinformatics, 2019
AbstractThe functional evolution of proteins advances through gene duplication followed by functional drift, whereas molecular evolution occurs through random mutational events. Over time, protein active‐site structures or functional epitopes remain highly conserved, which enables relationships to be inferred between distant orthologs or paralogs.
Jonathan Catazaro   +3 more
openaire   +2 more sources

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