Results 31 to 40 of about 101,248 (253)
A multiresolution approach to automated classification of protein subcellular location images
BMC Bioinformatics, 2007 Background Fluorescence microscopy is widely used to determine the subcellular location of proteins. Efforts to determine location on a proteome-wide basis create a need for automated methods to analyze the resulting images.
Srinivasa Gowri +6 more
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A multi-label classifier for predicting the subcellular localization of gram-negative bacterial proteins with both single and multiple sites. [PDF]
PLoS ONE, 2011 Prediction of protein subcellular localization is a challenging problem, particularly when the system concerned contains both singleplex and multiplex proteins. In this paper, by introducing the "multi-label scale" and hybridizing the information of gene
Xuan Xiao, Zhi-Cheng Wu, Kuo-Chen Chou
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A new method for predicting the subcellular localization of eukaryotic proteins with both single and multiple sites: Euk-mPLoc 2.0. [PDF]
PLoS ONE, 2010 Information of subcellular locations of proteins is important for in-depth studies of cell biology. It is very useful for proteomics, system biology and drug development as well.
Kuo-Chen Chou, Hong-Bin Shen
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Esub8: A novel tool to predict protein subcellular localizations in eukaryotic organisms
BMC Bioinformatics, 2004 Background Subcellular localization of a new protein sequence is very important and fruitful for understanding its function. As the number of new genomes has dramatically increased over recent years, a reliable and efficient system to predict protein ...
Liu Bing +3 more
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Predicting the subcellular location of prokaryotic proteins with DeepLocPro [PDF]
BioinformaticsAbstract Protein subcellular location prediction is a widely explored task in bioinformatics because of its importance in proteomics research. We propose DeepLocPro, an extension to the popular method DeepLoc, tailored specifically to archaeal and bacterial organisms.
Jaime Moreno +3 more
openaire +5 more sources
Adaptive Multiresolution Techniques for Subcellular Protein Location Classification [PDF]
2006 IEEE International Conference on Acoustics Speed and Signal Processing Proceedings, 2006 We propose an adaptive multiresolution (MR) approach for classification of fluorescence microscopy images of subcellular protein locations, providing biologically relevant information. These images have highly localized features both in space and frequency which naturally leads us to MR tools.
Gowri Srinivasa +4 more
openaire +2 more sources
BMC Bioinformatics, 2019 Background Subcellular localization prediction of protein is an important component of bioinformatics, which has great importance for drug design and other applications.
Yu-hua Yao +8 more
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TargetDB: a database of peptides targeting proteins to subcellular locations [PDF]
Bioinformatics, 1999 TargetDB is a relational database designed to represent data on protein targeting sequences, mutant signals, subcellular targets and source organisms.TargetDB is accessible at http://molbio.nmsu.edu:81. The web interface supports both direct data authoring and database query functions.moconnel@nmsu.
T. Wei, Michael O'Connell
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DNA ligase LigE increases bacterial transformation with damaged extracellular DNA
FEBS Letters, EarlyView.The DNA ligase LigE from the naturally competent Gram‐negative bacterium Neisseria gonorrhoaea increases transformation with cut extracellular DNA. This process is ATP‐dependent and relies on the catalytic activity of LigE; it also requires that LigE contains an intact periplasmic localisation sequence, indicating that ligE functions in the periplasm ...
Jolyn Pan +4 more
wiley +1 more source
BioTechnologia, 2017 The prediction of subcellular locations of proteins can provide useful hints for revealing their functions as well as for understanding the mechanisms of some diseases and, finally, for developing novel drugs.
Al Mehedi Hasan +2 more
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